RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 DDX18Q9NVP1 670 aaKnown RBP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 BTN3A1O00481 513 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 SEC22BO75396 215 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 NUMBP49757 651 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 GRIK3Q13003 919 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 CAMK1DQ8IU85 385 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 ZDHHC13Q8IUH4 622 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 RORBQ92753 470 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 SMPD4Q9NXE4 827 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 ENOPH1Q9UHY7 261 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 SPACA6W5XKT8 324 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 COX4I1P13073 169 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 LBPP18428 481 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 PIK3CGP48736 1102 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 OOSP2Q86WS3 158 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 ITFG1Q8TB96 612 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 ZNF558Q96NG5 402 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 YIPF2Q9BWQ6 316 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 UBA2Q9UBT2 640 aaPredicted RBP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 CLUHO75153 1309 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 IGLV3-22A0A075B6J6 115 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 CHN2P52757 468 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 RPL7AP62424 266 aaKnown RBP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 C16orf72Q14CZ0 275 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 ZCCHC7Q8N3Z6 543 aaKnown RBP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 C12orf42Q96LP6 360 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 ZFP42Q96MM3 310 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 POLR1EQ9GZS1 481 aaKnown RBP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 THG1LQ9NWX6 298 aaKnown RBP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 BTBD19C9JJ37 291 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 EDF1O60869 148 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 SERPINA6P08185 405 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 MMP3P08254 477 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ATP5F1P24539 256 aaPredicted RBP16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 TAS2R40P59535 323 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 NEDD8Q15843 81 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ARHGAP17Q68EM7 881 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ERAP2Q6P179 960 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 DCLRE1AQ6PJP8 1040 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 HGH1Q9BTY7 390 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 SENP6Q9GZR1 1112 aaPredicted RBP16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 MIEF1Q9NQG6 463 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 FAM208AQ9UK61 1670 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ENTPD5O75356 428 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 GRK3P35626 688 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 HK2P52789 917 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 PURAQ00577 322 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 PPM1LQ5SGD2 360 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 HGSNATQ68CP4 663 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 NECAB2Q7Z6G3 386 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 LRRC49Q8IUZ0 686 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 NLGN2Q8NFZ4 835 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 PADI4Q9UM07 663 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 C1orf232A0A0U1RR37 186 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 RGS14O43566 566 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 FKTNO75072 461 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 IGSF6O95976 241 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 HSMCR30P0CW71 290 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ATP4AP20648 1035 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 PIK3R1P27986 724 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 TTKP33981 857 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 CREMQ03060 361 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 FAM228AQ86W67 206 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 KRT78Q8N1N4 520 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 TMEM132CQ8N3T6 1108 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 PCDH20Q8N6Y1 951 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 SPPL2AQ8TCT8 520 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 DCUN1D5Q9BTE7 237 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ROGDIQ9GZN7 287 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ARHGAP28Q9P2N2 729 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 SLIT2O94813 1529 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ATRNL1Q5VV63 1379 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 RGSL1A5PLK6 1076 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 HS6ST1O60243 411 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 TSHZ1Q6ZSZ6 1077 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 SEMA6AQ9H2E6 1030 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 RNPEPQ9H4A4 650 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 FAM105AQ9NUU6 356 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 AHSPQ9NZD4 102 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 KLHL3Q9UH77 587 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 ANAPC2Q9UJX6 822 aa16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 TNPO3Q9Y5L0 923 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-202ENST00000503427 FAM220BPB1ANY3 271 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 KPNA4O00629 521 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 STAU1O95793 577 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 EPS8Q12929 822 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 SQLEQ14534 574 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 DHDDSQ86SQ9 333 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 CLEC4DQ8WXI8 215 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 SH3GL2Q99962 352 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 SLCO1B3Q9NPD5 702 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 TSPAN3O60637 253 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 DARSP14868 501 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 GSTA3Q16772 222 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 CCDC149Q6ZUS6 474 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 STK40Q8N2I9 435 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 STAG3L4Q8TBR4 150 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms