RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 METTL3Q86U44 580 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 TMEFF1Q8IYR6 380 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 RYBPQ8N488 228 aaPredicted RBP17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 LZTR1Q8N653 840 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 PCDH20Q8N6Y1 951 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 OR2A12Q8NGT7 310 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 PCDH19Q8TAB3 1148 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 TOE1Q96GM8 510 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 HINFPQ9BQA5 517 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 CEP44Q9C0F1 390 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 PABPC3Q9H361 631 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 SP110Q9HB58 689 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 NCDNQ9UBB6 729 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 UBA2Q9UBT2 640 aaPredicted RBP17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 ADGRG1Q9Y653 693 aa17.13■□□□□ 0.33
TSPAN17-203ENST00000503030 SPAG17Q6Q759 2223 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 ZFHX2Q9C0A1 2572 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 MCF2LO15068 1137 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 NRDCO43847 1150 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 PRAMEF11O60813 436 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 NDUFS2O75306 463 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 RHOBTB1O94844 696 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 CD6P30203 668 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 SLC8A1P32418 973 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 SERPINB6P35237 376 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 ZBTB16Q05516 673 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 PMS2CLQ68D20 193 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 LAIR1Q6GTX8 287 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 ARMCX6Q7L4S7 300 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 LPCAT2Q7L5N7 544 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 CHST14Q8NCH0 376 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 GRIN3AQ8TCU5 1115 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 RNF25Q96BH1 459 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 FBXL12Q9NXK8 326 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 DDX56Q9NY93 547 aaKnown RBP17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 GMEB2Q9UKD1 530 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 ABCA7Q8IZY2 2146 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 SDK1Q7Z5N4 2213 aa17.12■□□□□ 0.33
TSPAN17-203ENST00000503030 PLXND1Q9Y4D7 1925 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 THADAQ6YHU6 1953 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 FRYLO94915 3013 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 CXorf51AA0A1B0GTR3 108 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 A0A1W2PP55 124 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 C1QTNF3-AMACRE9PGA6 284 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 PSTPIP1O43586 416 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 MFSD11O43934 449 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 ZNF821O75541 412 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 RNASEH2AO75792 299 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 ADH1BP00325 375 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 OXTRP30559 389 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 CHRNA3P32297 505 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 DHPSP49366 369 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 METAP1P53582 386 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 RHOAP61586 193 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 CCZ1BP86790 482 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 CCZ1P86791 482 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 IFI16Q16666 785 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 CARD16Q5EG05 197 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 NCBP2-AS2Q69YL0 99 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 DPY19L3Q6ZPD9 716 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 ATPAF2Q8N5M1 289 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 OR6K2Q8NGY2 324 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 PIP4K2CQ8TBX8 421 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 ZC3H10Q96K80 434 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 CALR3Q96L12 384 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 OMDQ99983 421 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 PDFQ9HBH1 243 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 HECAQ9UBI9 543 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 IL36AQ9UHA7 158 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 IPO11Q9UI26 975 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 SARDHQ9UL12 918 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 SCML1Q9UN30 329 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 NCKAP1Q9Y2A7 1128 aa17.11■□□□□ 0.33
TSPAN17-203ENST00000503030 GPR179Q6PRD1 2367 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 GRID2IPA4D2P6 1211 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 PLK4O00444 970 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 ALOX15BO15296 676 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 MAP3K6O95382 1288 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 CTSLP07711 333 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 C5AR1P21730 350 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 MARCKSL1P49006 195 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 CCNHP51946 323 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 INO80DQ53TQ3 878 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 ARSIQ5FYB1 569 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 ATXN7L2Q5T6C5 722 aaPredicted RBP17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 FAM46CQ5VWP2 391 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 ALYREFQ86V81 257 aaKnown RBP17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 RFX6Q8HWS3 928 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 HDDC3Q8N4P3 179 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 AADATQ8N5Z0 425 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 PQLC3Q8N755 202 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 KIAA1524Q8TCG1 905 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 CASKIN2Q8WXE0 1202 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 KRT35Q92764 455 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 ISG20Q96AZ6 181 aaKnown RBP17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 FAF2Q96CS3 445 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 EXOC2Q96KP1 924 aa17.1■□□□□ 0.33
TSPAN17-203ENST00000503030 RNF157Q96PX1 679 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms