RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PEX5P50542 639 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 KIAA1324Q6UXG2 1013 aaKnown RBP25.58■■□□□ 1.69
LSM6-202ENST00000502781 LEKR1Q6ZMV7 388 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 LRRC49Q8IUZ0 686 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 RCOR2Q8IZ40 523 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 PLD5Q8N7P1 536 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 EXD1Q8NHP7 514 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 CCDC66A2RUB6 948 aa25.57■■□□□ 1.68
LSM6-202ENST00000502781 TMCC1O94876 653 aa25.57■■□□□ 1.68
LSM6-202ENST00000502781 ZRANB2O95218 330 aaKnown RBP eCLIP25.57■■□□□ 1.68
LSM6-202ENST00000502781 PTMAP06454 111 aaKnown RBP25.57■■□□□ 1.68
LSM6-202ENST00000502781 IL10RBQ08334 325 aa25.57■■□□□ 1.68
LSM6-202ENST00000502781 RLN3Q8WXF3 142 aa25.57■■□□□ 1.68
LSM6-202ENST00000502781 OR8D1Q8WZ84 308 aa25.57■■□□□ 1.68
LSM6-202ENST00000502781 TNKS2Q9H2K2 1166 aa25.57■■□□□ 1.68
LSM6-202ENST00000502781 CD93Q9NPY3 652 aa25.57■■□□□ 1.68
LSM6-202ENST00000502781 MAFKO60675 156 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 GALNT2Q10471 571 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 BYSLQ13895 437 aaKnown RBP25.56■■□□□ 1.68
LSM6-202ENST00000502781 CST6Q15828 149 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 SPOCD1Q6ZMY3 1216 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 DPY19L3Q6ZPD9 716 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 CCDC114Q96M63 670 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 UBA2Q9UBT2 640 aaPredicted RBP25.56■■□□□ 1.68
LSM6-202ENST00000502781 AMFRQ9UKV5 643 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 PPM1HQ9ULR3 514 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 SCML1Q9UN30 329 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 NYNRINQ9P2P1 1898 aaKnown RBP25.56■■□□□ 1.68
LSM6-202ENST00000502781 IGHV1OR15-9A0A0B4J2B8 117 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 RNASEH1O60930 286 aaKnown RBP25.56■■□□□ 1.68
LSM6-202ENST00000502781 PEX11BO96011 259 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 GSRP00390 522 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 TPMTP51580 245 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 GBE1Q04446 702 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 SLC10A2Q12908 348 aaPredicted RBP25.56■■□□□ 1.68
LSM6-202ENST00000502781 CYTH1Q15438 398 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 ODF2Q5BJF6 829 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 CARD16Q5EG05 197 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 PEX26Q7Z412 305 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 CACUL1Q86Y37 369 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 MMAAQ8IVH4 418 aaKnown RBP25.56■■□□□ 1.68
LSM6-202ENST00000502781 FRMD1Q8N878 549 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 SUMF1Q8NBK3 374 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 UBE2Q2Q8WVN8 375 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 ALG3Q92685 438 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 VOPP1Q96AW1 172 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 RBM41Q96IZ5 413 aaKnown RBP25.56■■□□□ 1.68
LSM6-202ENST00000502781 ZNF830Q96NB3 372 aaPredicted RBP25.56■■□□□ 1.68
LSM6-202ENST00000502781 ZNF599Q96NL3 588 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 SP110Q9HB58 689 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 DTLQ9NZJ0 730 aa25.56■■□□□ 1.68
LSM6-202ENST00000502781 hCG_1818297A0A087WSY0 165 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 MIF4GDA9UHW6 222 aaKnown RBP25.55■■□□□ 1.68
LSM6-202ENST00000502781 DNTTP04053 509 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 CTSLP07711 333 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 RFTN1Q14699 578 aaPredicted RBP25.55■■□□□ 1.68
LSM6-202ENST00000502781 PPP2R5EQ16537 467 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 TFDP3Q5H9I0 405 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 DSG4Q86SJ6 1040 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 C11orf74Q86VG3 221 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 FAM160A2Q8N612 972 aaPredicted RBP25.55■■□□□ 1.68
LSM6-202ENST00000502781 CHST14Q8NCH0 376 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 OR2AP1Q8NGE2 309 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 ZC3H10Q96K80 434 aaKnown RBP25.55■■□□□ 1.68
LSM6-202ENST00000502781 SPACA7Q96KW9 195 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 PHOX2BQ99453 314 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 MAK16Q9BXY0 300 aaKnown RBP25.55■■□□□ 1.68
LSM6-202ENST00000502781 PABPC3Q9H361 631 aaKnown RBP25.55■■□□□ 1.68
LSM6-202ENST00000502781 LZTFL1Q9NQ48 299 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 LHX3Q9UBR4 397 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 MBD1Q9UIS9 605 aaPredicted RBP25.55■■□□□ 1.68
LSM6-202ENST00000502781 SARDHQ9UL12 918 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 CYP8B1Q9UNU6 501 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 INVSQ9Y283 1065 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 FARP1Q9Y4F1 1045 aaPredicted RBP25.55■■□□□ 1.68
LSM6-202ENST00000502781 WASF2Q9Y6W5 498 aa25.55■■□□□ 1.68
LSM6-202ENST00000502781 PLXND1Q9Y4D7 1925 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 APOL1O14791 398 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 FTCDO95954 541 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 ADH1BP00325 375 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 ACADMP11310 421 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 ZFXP17010 805 aaPredicted RBP25.54■■□□□ 1.68
LSM6-202ENST00000502781 BCKDHBP21953 392 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 CHRNA3P32297 505 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 GARSP41250 739 aaKnown RBP25.54■■□□□ 1.68
LSM6-202ENST00000502781 RECQLP46063 649 aaPredicted RBP25.54■■□□□ 1.68
LSM6-202ENST00000502781 RWDD2BP57060 319 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 SIM2Q14190 667 aaPredicted RBP25.54■■□□□ 1.68
LSM6-202ENST00000502781 USP30Q70CQ3 517 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 ATPAF2Q8N5M1 289 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 TMIEQ8NEW7 156 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.54■■□□□ 1.68
LSM6-202ENST00000502781 FAM131CQ96AQ9 280 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 HES6Q96HZ4 224 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 TSGA13Q96PP4 275 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 TM6SF2Q9BZW4 377 aa25.54■■□□□ 1.68
LSM6-202ENST00000502781 MID1O15344 667 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 DDX3YO15523 660 aaKnown RBP25.53■■□□□ 1.68
LSM6-202ENST00000502781 BNIP3LO60238 219 aa25.53■■□□□ 1.68
LSM6-202ENST00000502781 C5AR1P21730 350 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms