RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CPNE8Q86YQ8 564 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 MRPL57Q9BQC6 102 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 LATS2Q9NRM7 1088 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 TMEM161AQ9NX61 479 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 PENKP01210 267 aaPredicted RBP17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 SLC7A2P52569 658 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 FAM126BQ8IXS8 530 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 ZC3H3Q8IXZ2 948 aaKnown RBP17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 JOSD2Q8TAC2 188 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 TXLNGYQ9BZA5 131 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 UBIAD1Q9Y5Z9 338 aa17.44■□□□□ 0.38
HMGXB3-201ENST00000502717 LINC00854A0A1B0GVQ3 168 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 TIPRLO75663 272 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 CCR3P51677 355 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 PLK1P53350 603 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 RAB14P61106 215 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 HPCAP84074 193 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 AMHR2Q16671 573 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 PDCD4Q53EL6 469 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 ANKS6Q68DC2 871 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 PLEKHH3Q7Z736 793 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 LUZP2Q86TE4 346 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 ADHFE1Q8IWW8 467 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 UBR7Q8N806 425 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 SNX31Q8N9S9 440 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 AFG1LQ8WV93 481 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 HPS1Q92902 700 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 HNRNPCL2B2RXH8 293 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 DDNO94850 711 aaPredicted RBP17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 PGK2P07205 417 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 ZIK1Q3SY52 487 aaPredicted RBP17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 CMC1Q7Z7K0 106 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 ZFPM1Q8IX07 1006 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 OR5B17Q8NGF7 314 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 DCAKDQ8WVC6 231 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 LHX5Q9H2C1 402 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 VTA1Q9NP79 307 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 GIN1Q9NXP7 522 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 ZNF682O95780 498 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 GLP2RO95838 553 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 HOXB8P17481 243 aaPredicted RBP17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 VWA5B1Q5TIE3 1220 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 BNIPLQ7Z465 357 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 BBS7Q8IWZ6 715 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 CERS5Q8N5B7 392 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 C3orf18Q9UK00 162 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 ACKR2O00590 384 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 NRP2O60462 931 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 LRCH4O75427 683 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 KRT20P35900 424 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 PTRHD1Q6GMV3 140 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 FAM45BPQ6NSW5 357 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 SYTL1Q8IYJ3 562 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 POC5Q8NA72 575 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 HM13Q8TCT9 377 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 BLOC1S5Q8TDH9 187 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 SEPT8Q92599 483 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 MTERF3Q96E29 417 aa17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 PARP4Q9UKK3 1724 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-201ENST00000502717 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 ZBTB11O95625 1053 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 DLG1Q12959 904 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 AMER2Q8N7J2 671 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 KCTD4Q8WVF5 259 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 SLC7A6OSQ96CW6 309 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 HOPXQ9BPY8 73 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 COQ4Q9Y3A0 265 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 PCDHB12Q9Y5F1 795 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 ATG7O95352 703 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 RPLP2P05387 115 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 LTA4HP09960 611 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 SLC5A3P53794 718 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 NR6A1Q15406 480 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 FAM117BQ6P1L5 589 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 ZBTB46Q86UZ6 589 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 FBXO39Q8N4B4 442 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 AADATQ8N5Z0 425 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 ZBTB8BQ8NAP8 495 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 LEMD2Q8NC56 503 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 LPGAT1Q92604 370 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 EBF4Q9BQW3 602 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 ADAM7Q9H2U9 754 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 TMEM245Q9H330 911 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 FAM198AQ9UFP1 575 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 KLHL3Q9UH77 587 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 MPSTP25325 297 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 IL12RB1P42701 662 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 SPIDRQ14159 915 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 PCID2Q5JVF3 399 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 NOTUMQ6P988 496 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 FAM183BPQ6ZVS7 135 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 RRM2BQ7LG56 351 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 TBC1D21Q8IYX1 336 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 FNDC5Q8NAU1 212 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 OR2T34Q8NGX1 318 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 OR2T3Q8NH03 318 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 LRRC15Q8TF66 581 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 RSPH1Q8WYR4 309 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 BTBD3Q9Y2F9 522 aa17.42■□□□□ 0.38
HMGXB3-201ENST00000502717 AP3M1Q9Y2T2 418 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms