RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 AMACRQ9UHK6 382 aa10.94□□□□□ -0.66
UBE2D3-212ENST00000502563 SALL4Q9UJQ4 1053 aa10.94□□□□□ -0.66
UBE2D3-212ENST00000502563 PPM1HQ9ULR3 514 aa10.94□□□□□ -0.66
UBE2D3-212ENST00000502563 PIEZO1Q92508 2521 aa10.94□□□□□ -0.66
UBE2D3-212ENST00000502563 USP34Q70CQ2 3546 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 SPAG17Q6Q759 2223 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 VPS13AQ96RL7 3174 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 IGHV1OR15-9A0A0B4J2B8 117 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 CCDC66A2RUB6 948 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 PRR23AA6NEV1 266 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 MIF4GDA9UHW6 222 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 C1QTNF3-AMACRE9PGA6 284 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 SPOPO43791 374 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 MT-CO1P00395 513 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 DNTTP04053 509 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 PRNPP04156 253 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 CCDC175P0C221 793 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 ACADMP11310 421 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 MX2P20592 715 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 CTNNA2P26232 953 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 CD6P30203 668 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 PTPN7P35236 360 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 WASP42768 502 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 MAPK8P45983 427 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 NR2C2P49116 596 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 TPMTP51580 245 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 RPS14P62263 151 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 SNRPD1P62314 119 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 CCZ1BP86790 482 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 CCZ1P86791 482 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 GALNT2Q10471 571 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 SIM2Q14190 667 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 ELF2Q15723 593 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 CST6Q15828 149 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 PPP2R5EQ16537 467 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 PLK5Q496M5 336 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 DAAM2Q86T65 1068 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 KIAA1328Q86T90 577 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 GPR161Q8N6U8 529 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 NPWQ8N729 165 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 KCTD6Q8NC69 237 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 ACRBPQ8NEB7 543 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 OR2AP1Q8NGE2 309 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 EXD1Q8NHP7 514 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 PCDH19Q8TAB3 1148 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 FOXJ1Q92949 421 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 ZNF419Q96HQ0 510 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 RBM41Q96IZ5 413 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 RNF157Q96PX1 679 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 SPON2Q9BUD6 331 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 OSBPL1AQ9BXW6 950 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 CPEB1Q9BZB8 566 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 SLC39A8Q9C0K1 460 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 BRD8Q9H0E9 1235 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 PABPC3Q9H361 631 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 ZDHHC4Q9NPG8 344 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 POLR3BQ9NW08 1133 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 RAB23Q9ULC3 237 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 SMG5Q9UPR3 1016 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 PCDHA3Q9Y5H8 950 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 R4GN57 208 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 OTOGLQ3ZCN5 2332 aa10.93□□□□□ -0.66
UBE2D3-212ENST00000502563 SNPHO15079 494 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 MAFKO60675 156 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 ZNF189O75820 626 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 RETP07949 1114 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 CD48P09326 243 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 GLDCP23378 1020 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 NUDT1P36639 197 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 RECQLP46063 649 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 PAPOLAP51003 745 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 RENBPP51606 427 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 HNRNPDQ14103 355 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 ATP13A4Q4VNC1 1196 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 CARD16Q5EG05 197 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 NCBP2-AS2Q69YL0 99 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 HEATR6Q6AI08 1181 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 ALG1LQ6GMV1 187 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 TIGD7Q6NT04 549 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 NEK5Q6P3R8 708 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 BZW1Q7L1Q6 419 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 RABEPKQ7Z6M1 372 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 RCOR2Q8IZ40 523 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 PQLC3Q8N755 202 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 KIAA1524Q8TCG1 905 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 RAPGEF5Q92565 580 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 HDAC11Q96DB2 347 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 FAM122AQ96E09 287 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 PPP1R16AQ96I34 528 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 PSKH2Q96QS6 385 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 TUBGCP5Q96RT8 1024 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 CALN1Q9BXU9 219 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 HDAC8Q9BY41 377 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 HAUS2Q9NVX0 235 aa10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 UBA2Q9UBT2 640 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 IPO11Q9UI26 975 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-212ENST00000502563 NUP205Q92621 2012 aa10.91□□□□□ -0.66
UBE2D3-212ENST00000502563 LRRD1A4D1F6 860 aa10.91□□□□□ -0.66
UBE2D3-212ENST00000502563 GRID2IPA4D2P6 1211 aa10.91□□□□□ -0.66
UBE2D3-212ENST00000502563 SMAD6O43541 496 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms