RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 TNFRSF10DQ9UBN6 386 aa5.4□□□□□ -1.54
FXN-205ENST00000498653 KLF15Q9UIH9 416 aa5.4□□□□□ -1.54
FXN-205ENST00000498653 GDAQ9Y2T3 454 aa5.4□□□□□ -1.54
FXN-205ENST00000498653 OAS3Q9Y6K5 1087 aaKnown RBP5.4□□□□□ -1.54
FXN-205ENST00000498653 NCOA6Q14686 2063 aaPredicted RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 CPED1A4D0V7 1026 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 FAM171A2A8MVW0 826 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 D6RAR5 112 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 K7ERI5 159 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 K7ESM1 405 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 RNF225M0QZC1 329 aaPredicted RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 EIF3DO15371 548 aaKnown RBP eCLIP5.39□□□□□ -1.55
FXN-205ENST00000498653 PHF1O43189 567 aaPredicted RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 CRLF1O75462 422 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 PIAS2O75928 621 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 DNAJB5O75953 348 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 PRPF6O94906 941 aaKnown RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 CES1P23141 567 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 UGT1A3P35503 534 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 MAPK10P53779 464 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 PMS2P54278 862 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 PTENP60484 403 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 YWHAHQ04917 246 aaPredicted RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 GAD2Q05329 585 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 POU5F1BQ06416 359 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 STRN3Q13033 797 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 STK4Q13043 487 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 BMT2Q1RMZ1 405 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 MGAT5BQ3V5L5 792 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 COBLL1Q53SF7 1204 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 GRAMD4Q6IC98 578 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 HMBOX1Q6NT76 420 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 LINGO4Q6UY18 593 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 ZNF720Q7Z2F6 126 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 FAM35AQ86V20 835 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 FJX1Q86VR8 437 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 SYCP3Q8IZU3 236 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 GUF1Q8N442 669 aaKnown RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 KIAA1958Q8N8K9 716 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 TMEM161BQ8NDZ6 487 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 APPL2Q8NEU8 664 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 ZNF507Q8TCN5 953 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 SCARF2Q96GP6 870 aaPredicted RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 FEM1CQ96JP0 617 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 BTBD6Q96KE9 485 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 ACCSQ96QU6 501 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 FIZ1Q96SL8 496 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 NTPCRQ9BSD7 190 aaKnown RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 TMEM121Q9BTD3 319 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 LHX5Q9H2C1 402 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 TSPY26PQ9H489 355 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 ST6GALNAC4Q9H4F1 302 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 MLXIPLQ9NP71 852 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 ARHGAP28Q9P2N2 729 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 EXOC7Q9UPT5 735 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 OSGIN2Q9Y236 505 aa5.39□□□□□ -1.55
FXN-205ENST00000498653 TIMM13Q9Y5L4 95 aaPredicted RBP5.39□□□□□ -1.55
FXN-205ENST00000498653 BICDL2A1A5D9 508 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 ZSCAN5CA6NGD5 496 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 OR6C75A6NL08 312 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 INO80B-WBP1J3KQ70 363 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 AGRPO00253 132 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 E2F3O00716 465 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 PSMA7O14818 248 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 CALUO43852 315 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 TNFRSF21O75509 655 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 NEBLO76041 1014 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 FURINP09958 794 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 BMP6P22004 513 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 PRKCHP24723 683 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 ERCC5P28715 1186 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 PRCPP42785 496 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 GPR15P49685 360 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 CASP5P51878 434 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 ZNF132P52740 706 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 ZNF445P59923 1031 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 GTF2BQ00403 316 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 CDK18Q07002 472 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 NCBP1Q09161 790 aaKnown RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 PAK1Q13153 545 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 MYBPC2Q14324 1141 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 KNOP1Q1ED39 458 aaKnown RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 DPCR1Q3MIW9 517 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 ANO6Q4KMQ2 910 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 CT47A1Q5JQC4 288 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 CDCA2Q69YH5 1023 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 KLHL10Q6JEL2 608 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 DUS1LQ6P1R4 473 aaKnown RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 EPM2AIP1Q7L775 607 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 KRTAP1-3Q8IUG1 177 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 CEP97Q8IW35 865 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 NELFCDQ8IXH7 590 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 SMYD4Q8IYR2 804 aaPredicted RBP5.38□□□□□ -1.55
FXN-205ENST00000498653 CACNA2D3Q8IZS8 1091 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 KIAA0895Q8NCT3 520 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 ST6GALNAC3Q8NDV1 305 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 WDR48Q8TAF3 677 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 SCFD1Q8WVM8 642 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 NELFBQ8WX92 580 aa5.38□□□□□ -1.55
FXN-205ENST00000498653 STARD8Q92502 1023 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms