RNA–Protein interactions for RNA: ENST00000498574.1

IGKV1-39-201, Transcript of immunoglobulin kappa variable 1-39 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGKV1-39, Length 398 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39-201ENST00000498574 FAM13AO94988 1023 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 VARSP26640 1264 aaKnown RBP8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 ABCD1P33897 745 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 CSKP41240 450 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 MAP3K7CLP57077 242 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 RNASE9P60153 205 aaKnown RBP8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 GTF2BQ00403 316 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 CNTN1Q12860 1018 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 PNOCQ13519 176 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 CUL4BQ13620 913 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 ELAVL3Q14576 367 aaKnown RBP8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 C16orf72Q14CZ0 275 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 ZNF284Q2VY69 593 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 PRRT3Q5FWE3 981 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 AGBL4Q5VU57 503 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 FAM46CQ5VWP2 391 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 SASS6Q6UVJ0 657 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 UNC13DQ70J99 1090 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 GPBP1Q86WP2 473 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 Q8N9G6 341 aaPredicted RBP8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 ZMIZ2Q8NF64 920 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 WFDC5Q8TCV5 224 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 BTN2A2Q8WVV5 523 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 CCDC47Q96A33 483 aaKnown RBP8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 SAAL1Q96ER3 474 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 BMFQ96LC9 184 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 CDK5RAP1Q96SZ6 601 aaKnown RBP8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 MDFIQ99750 246 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 IKZF4Q9H2S9 585 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 PDE11AQ9HCR9 933 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 SLCO3A1Q9UIG8 710 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 ODF2LQ9ULJ1 636 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 HS3ST3A1Q9Y663 406 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 JMJD1CQ15652 2540 aa8.21□□□□□ -1.1
IGKV1-39-201ENST00000498574 CSPG4Q6UVK1 2322 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 DIDO1Q9BTC0 2240 aaKnown RBP8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 SYCE3A1L190 88 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 POM121BA6NF01 834 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 KLRC4O43908 158 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 RFPL1O75677 317 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 PRPF6O94906 941 aaKnown RBP8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 CBX6O95503 412 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 TNNC2P02585 160 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 RPN1P04843 607 aaKnown RBP8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 PRR29P0C7W0 189 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 GAP43P17677 238 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 PTGER4P35408 488 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 PSEN1P49768 467 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 ZNF131P52739 623 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 HDAC4P56524 1084 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 PTK2BQ14289 1009 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 NR6A1Q15406 480 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 COBLL1Q53SF7 1204 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 NEK5Q6P3R8 708 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 GPRIN1Q7Z2K8 1008 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 SCD5Q86SK9 330 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 HORMAD1Q86X24 394 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 CCNJLQ8IV13 435 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 CCDC65Q8IXS2 484 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 GRAMD1CQ8IYS0 662 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 UNC5BQ8IZJ1 945 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 FUKQ8N0W3 1084 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 ARL10Q8N8L6 244 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 MLKLQ8NB16 471 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 ZSWIM2Q8NEG5 633 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 OR5B17Q8NGF7 314 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 STARD8Q92502 1023 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 PMEPA1Q969W9 287 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 JAKMIP2Q96AA8 810 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 BLZF1Q9H2G9 400 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 ZHX3Q9H4I2 956 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 PARVGQ9HBI0 331 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 CSNK1G1Q9HCP0 422 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 GPR27Q9NS67 375 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 INTS13Q9NVM9 706 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 ANO10Q9NW15 660 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 CLIC5Q9NZA1 410 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 MARCH2Q9P0N8 246 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 SIRPGQ9P1W8 387 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 APOBEC3BQ9UH17 382 aaKnown RBP8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 SARDHQ9UL12 918 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 STRIP2Q9ULQ0 834 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 ERVW-1Q9UQF0 538 aa8.2□□□□□ -1.1
IGKV1-39-201ENST00000498574 SCN8AQ9UQD0 1980 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 LOC101059948A0A1B0GTJ6 334 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 KRT18P05783 430 aaKnown RBP8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 SRPRAP08240 638 aaKnown RBP8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 FGF3P11487 239 aaPredicted RBP8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 CD99P14209 185 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 CD1EP15812 388 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 ITGA3P26006 1051 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 MAP4P27816 1152 aaKnown RBP8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 CLCN1P35523 988 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 PPP1R2P41236 205 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 CTSOP43234 321 aaPredicted RBP8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 RABIFP47224 123 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 TAS2R38P59533 333 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 TNNC1P63316 161 aa8.19□□□□□ -1.1
IGKV1-39-201ENST00000498574 TYRO3Q06418 890 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms