RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 DNASE2BQ8WZ79 361 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 RMDN1Q96DB5 314 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 MIR1-1HGQ9H1L0 117 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 C6orf106Q9H6K1 298 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 NOL6Q9H6R4 1146 aaKnown RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 RXFP3Q9NSD7 469 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 CWC15Q9P013 229 aaKnown RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 EVLQ9UI08 416 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 LCMT1Q9UIC8 334 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 CDV3Q9UKY7 258 aaKnown RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 SARDHQ9UL12 918 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 FZD4Q9ULV1 537 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 SLC6A14Q9UN76 642 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 FCF1Q9Y324 198 aaKnown RBP13.06□□□□□ -0.32
HSPG2-213ENST00000498495 ACTL7AQ9Y615 435 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 PIEZO1Q92508 2521 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 OTOGLQ3ZCN5 2332 aa13.06□□□□□ -0.32
HSPG2-213ENST00000498495 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 RIF1Q5UIP0 2472 aaKnown RBP13.05□□□□□ -0.32
HSPG2-213ENST00000498495 GPR179Q6PRD1 2367 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3DA0A087WVF3 549 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3IA0A087WXS9 549 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3EA0A087X179 549 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3KA0A087X1G2 549 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3FA6NER0 549 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3LB9A6J9 549 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 H3BRJ5 948 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 FSBPO95073 299 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 CD160O95971 181 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 PRNPP04156 253 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 SERPINF2P08697 491 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3HP0C7X1 549 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TCF4P15884 667 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 ARL4AP40617 200 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 PUM1Q14671 1186 aaKnown RBP eCLIP13.05□□□□□ -0.32
HSPG2-213ENST00000498495 DPYSL2Q16555 572 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 POM121L1PQ3SYA9 428 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 ARSIQ5FYB1 569 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3GQ6DHY5 549 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3CQ6IPX1 549 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 LEKR1Q6ZMV7 388 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TBC1D3Q8IZP1 549 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-213ENST00000498495 RYBPQ8N488 228 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-213ENST00000498495 CHST14Q8NCH0 376 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 TMIEQ8NEW7 156 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 SLC35G2Q8TBE7 412 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 SNX19Q92543 992 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 ISG20Q96AZ6 181 aaKnown RBP13.05□□□□□ -0.32
HSPG2-213ENST00000498495 HMCESQ96FZ2 354 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 HEPHQ9BQS7 1158 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 SLC39A8Q9C0K1 460 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 DYRK4Q9NR20 520 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 HECAQ9UBI9 543 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-213ENST00000498495 SERGEFQ9UGK8 458 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 IL36AQ9UHA7 158 aa13.05□□□□□ -0.32
HSPG2-213ENST00000498495 EIF2B4Q9UI10 523 aaKnown RBP13.05□□□□□ -0.32
HSPG2-213ENST00000498495 A0A1B0GTW7 788 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 ARHGAP42A6NI28 874 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 PLK4O00444 970 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 KPNA3O00505 521 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 ZNF821O75541 412 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 PROSCO94903 275 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 MAGEA1P43355 309 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 ATXN3P54252 364 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 SNRPD1P62314 119 aaKnown RBP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 SERINC3Q13530 473 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 KRT81Q14533 505 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 INO80DQ53TQ3 878 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 STPG1Q5TH74 334 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 KIAA0895LQ68EN5 471 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 TXNRD3NBQ6F5E7 133 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 NCEH1Q6PIU2 408 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 POLNQ7Z5Q5 900 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 PLPP6Q8IY26 295 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 LZTR1Q8N653 840 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 OR2T34Q8NGX1 318 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 TEKT4Q8WW24 435 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 CASKIN2Q8WXE0 1202 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 BIRC7Q96CA5 298 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 CELF6Q96J87 481 aaKnown RBP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 RTKNQ9BST9 563 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 EDEM2Q9BV94 578 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 TM6SF2Q9BZW4 377 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 LRRC19Q9H756 370 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 OSGEPQ9NPF4 335 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 DLL3Q9NYJ7 618 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 NUP205Q92621 2012 aa13.04□□□□□ -0.32
HSPG2-213ENST00000498495 EP300Q09472 2414 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-213ENST00000498495 LNP1A1A4G5 178 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 TMEM110-MUSTN1A8MSY1 372 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 SLC30A4O14863 429 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 BCAT2O15382 392 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-213ENST00000498495 SLC7A4O43246 635 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 LEFTY1O75610 366 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 CTSLP07711 333 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 SYPP08247 313 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 ENGP17813 658 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms