RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ADRA1BP35368 520 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 LHX1P48742 406 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 COPAP53621 1224 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 ARHGAP8P85298 464 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 KDSRQ06136 332 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 TUBB3Q13509 450 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 BTG3Q14201 252 aaPredicted RBP12.66□□□□□ -0.38
AFF3-215ENST00000498090 RCN2Q14257 317 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 OTUD1Q5VV17 481 aaPredicted RBP12.66□□□□□ -0.38
AFF3-215ENST00000498090 KIAA0319Q5VV43 1072 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 ARMC3Q5W041 872 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 CES4AQ5XG92 561 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 MYLK4Q86YV6 388 aaPredicted RBP12.66□□□□□ -0.38
AFF3-215ENST00000498090 OR6Y1Q8NGX8 325 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 HDAC11Q96DB2 347 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 SPDL1Q96EA4 605 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 YME1L1Q96TA2 773 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 CCDC28BQ9BUN5 200 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 TRIM62Q9BVG3 475 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 COLEC11Q9BWP8 271 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 C20orf27Q9GZN8 174 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 VCX3BQ9H321 246 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 CASS4Q9NQ75 786 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 MARCOQ9UEW3 520 aaPredicted RBP12.66□□□□□ -0.38
AFF3-215ENST00000498090 VANGL2Q9ULK5 521 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 ANKRD6Q9Y2G4 727 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 PCDHB12Q9Y5F1 795 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 CREB3O43889 395 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 SNUPNO95149 360 aaKnown RBP12.65□□□□□ -0.38
AFF3-215ENST00000498090 EFEMP2O95967 443 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 ALDH2P05091 517 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 PAX3P23760 479 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 TKTP29401 623 aaKnown RBP12.65□□□□□ -0.38
AFF3-215ENST00000498090 POLD2P49005 469 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 TPI1P60174 286 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 RPL10AP62906 217 aaKnown RBP12.65□□□□□ -0.38
AFF3-215ENST00000498090 IRX4P78413 519 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 SEMA3BQ13214 749 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 PRPSAP1Q14558 356 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 C1orf146Q5VVC0 180 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 HERC6Q8IVU3 1022 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 NR1H4Q96RI1 486 aaPredicted RBP12.65□□□□□ -0.38
AFF3-215ENST00000498090 ZNF184Q99676 751 aaPredicted RBP12.65□□□□□ -0.38
AFF3-215ENST00000498090 TRIM56Q9BRZ2 755 aaKnown RBP12.65□□□□□ -0.38
AFF3-215ENST00000498090 THTPAQ9BU02 230 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 VN1R3Q9BXE9 311 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 GPR62Q9BZJ7 368 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 IL22Q9GZX6 179 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 GBA3Q9H227 469 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 SNX15Q9NRS6 342 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 NDE1Q9NXR1 346 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 DDX43Q9NXZ2 648 aaKnown RBP12.65□□□□□ -0.38
AFF3-215ENST00000498090 SEPT10Q9P0V9 454 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 SCOCQ9UIL1 159 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 SLC4A7Q9Y6M7 1214 aa12.65□□□□□ -0.38
AFF3-215ENST00000498090 SLC22A2O15244 555 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 CCNT2O60583 730 aaKnown RBP12.64□□□□□ -0.39
AFF3-215ENST00000498090 TADA2AO75478 443 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 TYMPP19971 482 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 PTPN3P26045 913 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 BMP8BP34820 402 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 CPOXP36551 454 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 IDH3AP50213 366 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 TKTL1P51854 596 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 SESN3P58005 492 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 COG7P83436 770 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 XIAPP98170 497 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 FUT10Q6P4F1 479 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 RIPOR1Q6ZS17 1223 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 ZCCHC23Q6ZST2 131 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 CLEC20AQ6ZU45 233 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 LINC00523Q86TU6 105 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 C10orf107Q8IVU9 208 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 SLC39A11Q8N1S5 342 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 CCDC33Q8N5R6 958 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 LRRN4Q8WUT4 740 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 EPAS1Q99814 870 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 SLC7A8Q9UHI5 535 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 FBXW11Q9UKB1 542 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.64□□□□□ -0.39
AFF3-215ENST00000498090 LCHNA4D1U4 455 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 MAGEA13PA6NCF6 341 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 SIN3BO75182 1162 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 ANPEPP15144 967 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 ERCC2P18074 760 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 ADSLP30566 484 aaPredicted RBP12.64□□□□□ -0.39
AFF3-215ENST00000498090 HTR7P34969 479 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 CPA2P48052 419 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 DAOAP59103 153 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 BTKQ06187 659 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 GALNT2Q10471 571 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 ANKRD20A4Q4UJ75 823 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 KCTD11Q693B1 232 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 FAM109BQ6ICB4 259 aaPredicted RBP12.64□□□□□ -0.39
AFF3-215ENST00000498090 NAPEPLDQ6IQ20 393 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 RNF168Q8IYW5 571 aaPredicted RBP12.64□□□□□ -0.39
AFF3-215ENST00000498090 SCML4Q8N228 414 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 OR10T2Q8NGX3 314 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 PHOSPHO2Q8TCD6 241 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms