RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 RAB23Q9ULC3 237 aa20.17■□□□□ 0.82
HLA-B-255ENST00000498007 IGHV1OR15-9A0A0B4J2B8 117 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 CXorf51AA0A1B0GTR3 108 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 C3orf70A6NLC5 250 aaPredicted RBP20.16■□□□□ 0.82
HLA-B-255ENST00000498007 MID1O15344 667 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 MAP3K13O43283 966 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 KRT86O43790 486 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 PRAMEF11O60813 436 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 PALMO75781 387 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 MAP3K6O95382 1288 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 TPMTP51580 245 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 DSG4Q86SJ6 1040 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 FAM124AQ86V42 546 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 RFX6Q8HWS3 928 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 RYBPQ8N488 228 aaPredicted RBP20.16■□□□□ 0.82
HLA-B-255ENST00000498007 ATPAF2Q8N5M1 289 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 PQLC3Q8N755 202 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 LRRC57Q8N9N7 239 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 CHST14Q8NCH0 376 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 OR2A12Q8NGT7 310 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 GRIN3AQ8TCU5 1115 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 GANCQ8TET4 914 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 RNF157Q96PX1 679 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 PDFQ9HBH1 243 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 MBD1Q9UIS9 605 aaPredicted RBP20.16■□□□□ 0.82
HLA-B-255ENST00000498007 GUCA1BQ9UMX6 200 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.16■□□□□ 0.82
HLA-B-255ENST00000498007 FARP1Q9Y4F1 1045 aaPredicted RBP20.16■□□□□ 0.82
HLA-B-255ENST00000498007 CAPN6Q9Y6Q1 641 aa20.16■□□□□ 0.82
HLA-B-255ENST00000498007 ZNF821O75541 412 aaPredicted RBP20.15■□□□□ 0.82
HLA-B-255ENST00000498007 RHOAP61586 193 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 ZBTB16Q05516 673 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 PAFAH1B3Q15102 231 aaKnown RBP20.15■□□□□ 0.82
HLA-B-255ENST00000498007 POM121L1PQ3SYA9 428 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 MFSD7Q6UXD7 560 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 DPY19L3Q6ZPD9 716 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 CCDC50Q8IVM0 306 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 KATNAL2Q8IYT4 538 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 OR6K2Q8NGY2 324 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 CASKIN2Q8WXE0 1202 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 FAM122AQ96E09 287 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 PDLIM2Q96JY6 352 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 MAK16Q9BXY0 300 aaKnown RBP20.15■□□□□ 0.82
HLA-B-255ENST00000498007 PABPC3Q9H361 631 aaKnown RBP20.15■□□□□ 0.82
HLA-B-255ENST00000498007 SEMA4AQ9H3S1 761 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 LZTFL1Q9NQ48 299 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 ITM2CQ9NQX7 267 aa20.15■□□□□ 0.82
HLA-B-255ENST00000498007 IPO11Q9UI26 975 aaKnown RBP20.15■□□□□ 0.82
HLA-B-255ENST00000498007 SHROOM3Q8TF72 1996 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 PROB1E7EW31 1015 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 C1QTNF3-AMACRE9PGA6 284 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 MCF2LO15068 1137 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 ALOX15BO15296 676 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 FTCDO95954 541 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 ADH1BP00325 375 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 LMNAP02545 664 aaKnown RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 CHRNA3P32297 505 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 SLC8A1P32418 973 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 CTNNA1P35221 906 aaKnown RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 CCNHP51946 323 aaPredicted RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 METAP1P53582 386 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 DYNLT1P63172 113 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 RPL6Q02878 288 aaKnown RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 GBE1Q04446 702 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 IL10RBQ08334 325 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 LLGL1Q15334 1064 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 ELF2Q15723 593 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 PLK5Q496M5 336 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 INO80DQ53TQ3 878 aaPredicted RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 CARD16Q5EG05 197 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 ATXN7L2Q5T6C5 722 aaPredicted RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 PEX26Q7Z412 305 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 METTL3Q86U44 580 aaKnown RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 C11orf74Q86VG3 221 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 VSIG1Q86XK7 387 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 SYCE1Q8N0S2 351 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 PIP4K2CQ8TBX8 421 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 ISG20Q96AZ6 181 aaKnown RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 EXOC2Q96KP1 924 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 ZNF830Q96NB3 372 aaPredicted RBP20.14■□□□□ 0.81
HLA-B-255ENST00000498007 ZDHHC6Q9H6R6 413 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 IL36AQ9UHA7 158 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 SARDHQ9UL12 918 aa20.14■□□□□ 0.81
HLA-B-255ENST00000498007 A0A1W2PP55 124 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 ZNF487B1APH4 448 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 APOL1O14791 398 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 NDUFS2O75306 463 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 RNASEH2AO75792 299 aaKnown RBP20.13■□□□□ 0.81
HLA-B-255ENST00000498007 CTSLP07711 333 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 CD6P30203 668 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 CDKN2BP42772 138 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 SNRPD1P62314 119 aaKnown RBP20.13■□□□□ 0.81
HLA-B-255ENST00000498007 KAZNQ674X7 775 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 SLC36A4Q6YBV0 504 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 SPOCD1Q6ZMY3 1216 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 ARMCX6Q7L4S7 300 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 NT5DC3Q86UY8 548 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 RNF10Q8N5U6 811 aaKnown RBP20.13■□□□□ 0.81
HLA-B-255ENST00000498007 DEFB119Q8N690 84 aa20.13■□□□□ 0.81
HLA-B-255ENST00000498007 SUMF1Q8NBK3 374 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms