RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RETSATQ6NUM9 610 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 RNF144BQ7Z419 303 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 SERPINA11Q86U17 422 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 PALB2Q86YC2 1186 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 SPATA20Q8TB22 786 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 FAR1Q8WVX9 515 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 HMGB4Q8WW32 186 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 WBP2Q969T9 261 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 PCDHGB2Q9Y5G2 931 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 PCDHA10Q9Y5I2 948 aa4.1□□□□□ -1.75
SMC4-227ENST00000497984 GRM8O00222 908 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 ASNA1O43681 348 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 ITM2AO43736 263 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 DDAH2O95865 285 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 MYL3P08590 195 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 FCGR2AP12318 317 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 GLIPR1P48060 266 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 MXI1P50539 228 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 CLCNKBP51801 687 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 ACSM2AQ08AH3 577 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 ARL16Q0P5N6 197 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 SNTA1Q13424 505 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 CCSAPQ6IQ19 270 aaPredicted RBP4.09□□□□□ -1.75
SMC4-227ENST00000497984 CCAR1Q8IX12 1150 aaKnown RBP4.09□□□□□ -1.75
SMC4-227ENST00000497984 ZNF114Q8NC26 417 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 C2CD4CQ8TF44 421 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 IL17FQ96PD4 163 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 PDE11AQ9HCR9 933 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 LIN7CQ9NUP9 197 aaKnown RBP4.09□□□□□ -1.75
SMC4-227ENST00000497984 SLC25A13Q9UJS0 675 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 OSGIN2Q9Y236 505 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 SLC45A1Q9Y2W3 748 aa4.09□□□□□ -1.75
SMC4-227ENST00000497984 IGLV5-37A0A075B6J1 123 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 SERINC4A6NH21 518 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 NPIPB13A6NJU9 1138 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 NPIPB5A8MRT5 1133 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 NPIPB4C9JG80 1138 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 TULP2O00295 520 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 RNMTO43148 476 aaKnown RBP4.08□□□□□ -1.76
SMC4-227ENST00000497984 PAK4O96013 591 aaPredicted RBP4.08□□□□□ -1.76
SMC4-227ENST00000497984 CDK18Q07002 472 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 CCDC181Q5TID7 509 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 NAGSQ8N159 534 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 VPS52Q8N1B4 723 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 SLC2A12Q8TD20 617 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 RSC1A1Q92681 617 aa4.08□□□□□ -1.76
SMC4-227ENST00000497984 TAF15Q92804 592 aaKnown RBP eCLIP4.08□□□□□ -1.767e-26■■■■□ 25.9
SMC4-227ENST00000497984 SAA2-SAA4A0A096LPE2 208 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 A0A0U1RQJ8 604 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 TMEM247A6NEH6 219 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 PRAC2D3DTV9 90 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 NPIPB11E5RHQ5 1161 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 EYA2O00167 538 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 PRC1O43663 620 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 AFPP02771 609 aaKnown RBP4.07□□□□□ -1.76
SMC4-227ENST00000497984 KRT18P05783 430 aaKnown RBP4.07□□□□□ -1.76
SMC4-227ENST00000497984 GSTM2P28161 218 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 PCP4P48539 62 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 CDK7P50613 346 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 MYBPHQ13203 477 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 KRT71Q3SY84 523 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 CEP85LQ5SZL2 805 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 ADAM5Q6NVV9 412 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 WDR5BQ86VZ2 330 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 DCUN1D3Q8IWE4 304 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 SCN4BQ8IWT1 228 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 RBFAQ8N0V3 343 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 POC1AQ8NBT0 407 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 OR1N1Q8NGS0 311 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 KIAA1191Q96A73 305 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 TMEM18Q96B42 140 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 BICD1Q96G01 975 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 TXNDC15Q96J42 360 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 TRIM31Q9BZY9 425 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.07□□□□□ -1.761e-147■■■■■ 345.5
SMC4-227ENST00000497984 CERS4Q9HA82 394 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 ADAM18Q9Y3Q7 739 aa4.07□□□□□ -1.76
SMC4-227ENST00000497984 DYTNA2CJ06 578 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 DDTLA6NHG4 134 aaPredicted RBP4.06□□□□□ -1.76
SMC4-227ENST00000497984 AQP12BA6NM10 295 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 LMX1BO60663 402 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 MYL1P05976 194 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 MMP3P08254 477 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 NBPF7P0C2Y1 421 aaPredicted RBP4.06□□□□□ -1.76
SMC4-227ENST00000497984 DLG1Q12959 904 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 LONRF1Q17RB8 773 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 TBRG1Q3YBR2 411 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 STPG1Q5TH74 334 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 TBC1D9BQ66K14 1250 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 GATAD2AQ86YP4 633 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 GPT2Q8TD30 523 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 MUL1Q969V5 352 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 ARNT2Q9HBZ2 717 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 RCE1Q9Y256 329 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
SMC4-227ENST00000497984 A0A1B0GVM2 712 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 MAGEA13PA6NCF6 341 aa4.05□□□□□ -1.76
SMC4-227ENST00000497984 LYL1P12980 280 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms