RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 EFR3AQ14156 821 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 SMTNL2Q2TAL5 461 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 EDRF1Q3B7T1 1238 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 ALFQ53S48 1182 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 PIK3CD-AS1Q5SR53 167 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 DAB2IPQ5VWQ8 1189 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 LVRNQ6Q4G3 990 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 CAMK1DQ8IU85 385 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 HERC6Q8IVU3 1022 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 SCAIQ8N9R8 606 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 CMASQ8NFW8 434 aaPredicted RBP3.53□□□□□ -1.84
PSPC1-205ENST00000497722 C2CD4CQ8TF44 421 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 LPAR1Q92633 364 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 KIF1BPQ96EK5 621 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 TWNKQ96RR1 684 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 NPAS1Q99742 590 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 REEP2Q9BRK0 252 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 CHMP4AQ9BY43 222 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 HIPK2Q9H2X6 1198 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 HIPK3Q9H422 1215 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 MROH8Q9H579 483 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 TASP1Q9H6P5 420 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 TTC12Q9H892 705 aaPredicted RBP3.53□□□□□ -1.84
PSPC1-205ENST00000497722 VEZTQ9HBM0 779 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 ENTPD7Q9NQZ7 604 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 THSD1Q9NS62 852 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 TMEM248Q9NWD8 314 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 CNOT7Q9UIV1 285 aaKnown RBP3.53□□□□□ -1.84
PSPC1-205ENST00000497722 ARHGAP26Q9UNA1 814 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 LRRFIP2Q9Y608 721 aaKnown RBP3.53□□□□□ -1.84
PSPC1-205ENST00000497722 OR6C68A6NDL8 312 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 TSPAN4O14817 238 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 NCAM2O15394 837 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 TMCC1O94876 653 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 CNPP09543 421 aaKnown RBP3.52□□□□□ -1.85
PSPC1-205ENST00000497722 CHRNB1P11230 501 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 CKMT1AP12532 417 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 ARRB2P32121 409 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 CLCNKBP51801 687 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 RPP30P78346 268 aaKnown RBP3.52□□□□□ -1.85
PSPC1-205ENST00000497722 RHAGQ02094 409 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 INPP5JQ15735 1006 aaPredicted RBP3.52□□□□□ -1.85
PSPC1-205ENST00000497722 GPR68Q15743 365 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 PRTGQ2VWP7 1150 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 KIAA1755Q5JYT7 1200 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 ENTPD8Q5MY95 495 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 MAP3K21Q5TCX8 1036 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 NUGGCQ68CJ6 796 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 MMS22LQ6ZRQ5 1243 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 LRRC8DQ7L1W4 858 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 FAM217AQ8IXS0 508 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 TCP11L2Q8N4U5 519 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 SLC25A41Q8N5S1 370 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 ESX1Q8N693 406 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 LRRC57Q8N9N7 239 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 FAR1Q8WVX9 515 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 HSPH1Q92598 858 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 CNOT9Q92600 299 aaKnown RBP3.52□□□□□ -1.85
PSPC1-205ENST00000497722 KAT2AQ92830 837 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 EME1Q96AY2 570 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 HVCN1Q96D96 273 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 RNFT2Q96EX2 444 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 MASTLQ96GX5 879 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 TEFMQ96QE5 360 aaKnown RBP3.52□□□□□ -1.85
PSPC1-205ENST00000497722 HERC2P3Q9BVR0 1158 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 GPR63Q9BZJ6 419 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 IL21RQ9HBE5 538 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 ZNF304Q9HCX3 659 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 Q9N2J8 555 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 TXNRD2Q9NNW7 524 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 UPB1Q9UBR1 384 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 CNPY2Q9Y2B0 182 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 SLC4A4Q9Y6R1 1079 aa3.52□□□□□ -1.85
PSPC1-205ENST00000497722 SH2D7A6NKC9 451 aaPredicted RBP3.51□□□□□ -1.85
PSPC1-205ENST00000497722 NEURL1O76050 574 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 AGR2O95994 175 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 TBXAS1P24557 533 aaPredicted RBP3.51□□□□□ -1.85
PSPC1-205ENST00000497722 YWHAQP27348 245 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 AVPR2P30518 371 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 HNF1BP35680 557 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 PSMC2P35998 433 aaKnown RBP3.51□□□□□ -1.85
PSPC1-205ENST00000497722 CDKN2AP42771 156 aaKnown RBP3.51□□□□□ -1.85
PSPC1-205ENST00000497722 ENTPD1P49961 510 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 MVDP53602 400 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 TLE2Q04725 743 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 PPATQ06203 517 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 CHRNDQ07001 517 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.51□□□□□ -1.85
PSPC1-205ENST00000497722 RUNX2Q13950 521 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 PLK5Q496M5 336 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 SH2D4BQ5SQS7 431 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 CCDC70Q6NSX1 233 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 DLK2Q6UY11 383 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 WDR5BQ86VZ2 330 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 CHD1LQ86WJ1 897 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 TMEM174Q8WUU8 243 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 ASB5Q8WWX0 329 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 CTAGE1Q96RT6 745 aa3.51□□□□□ -1.85
PSPC1-205ENST00000497722 EIF2AK1Q9BQI3 630 aaKnown RBP3.51□□□□□ -1.85
PSPC1-205ENST00000497722 WDR83Q9BRX9 315 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms