RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 BDNFP23560 247 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 HOXA7P31268 230 aaPredicted RBP4.33□□□□□ -1.72
SMC4-225ENST00000497203 CYP2J2P51589 502 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 YPEL5P62699 121 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 KRT32Q14532 448 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 ETFDHQ16134 617 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 SLC18A3Q16572 532 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 TMTC3Q6ZXV5 915 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 CYB5R4Q7L1T6 521 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 DIS3L2Q8IYB7 885 aaKnown RBP4.33□□□□□ -1.72
SMC4-225ENST00000497203 SCAIQ8N9R8 606 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 SETD9Q8NE22 299 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.33□□□□□ -1.72
SMC4-225ENST00000497203 HSPH1Q92598 858 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 CUL5Q93034 780 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 FAM118BQ9BPY3 351 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 TREX2Q9BQ50 279 aaPredicted RBP4.33□□□□□ -1.72
SMC4-225ENST00000497203 CLSTN3Q9BQT9 956 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 LMAN2LQ9H0V9 348 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 PLEKHA5Q9HAU0 1116 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 Q9N2J8 555 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 SEMA4BQ9NPR2 832 aaPredicted RBP4.33□□□□□ -1.72
SMC4-225ENST00000497203 ENTPD7Q9NQZ7 604 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 KRT84Q9NSB2 600 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 BLOC1S4Q9NUP1 217 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 IL1RAPL1Q9NZN1 696 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 TBC1D14Q9P2M4 693 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 SARDHQ9UL12 918 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 TCRBV7S3A2A0A539 114 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 C17orf100A8MU93 164 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 KRTAP29-1A8MX34 341 aaPredicted RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 E5RJQ4 531 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 CEP104O60308 925 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 USO1O60763 962 aaKnown RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 SCGB1D1O95968 90 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 TOP3BO95985 862 aaKnown RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 URODP06132 367 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 HSP90AA1P07900 732 aaKnown RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 UBL4AP11441 157 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 EPHA8P29322 1005 aaPredicted RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 ABCD1P33897 745 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 EIF3BP55884 814 aaKnown RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 UFM1P61960 85 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 EFNB1P98172 346 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 Q4G0T1 1027 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 HAUS3Q68CZ6 603 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 ZNF425Q6IV72 752 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 IL20RBQ6UXL0 311 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 UBE2Q1Q7Z7E8 422 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 CPLX4Q7Z7G2 160 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 IGFN1Q86VF2 1251 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 CPXM2Q8N436 756 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 C11orf65Q8NCR3 313 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 DNAAF1Q8NEP3 725 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 ETNPPLQ8TBG4 499 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 RPL36ALQ969Q0 106 aaKnown RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 CLMNQ96JQ2 1002 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 NR1H4Q96RI1 486 aaPredicted RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 TMX4Q9H1E5 349 aaPredicted RBP4.32□□□□□ -1.72
SMC4-225ENST00000497203 SLC25A18Q9H1K4 315 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 FBXO4Q9UKT5 387 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 NAALADL1Q9UQQ1 740 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 CLDN16Q9Y5I7 305 aa4.32□□□□□ -1.72
SMC4-225ENST00000497203 KDM3AQ9Y4C1 1321 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 TEX13CA0A0J9YWL9 993 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 SLC22A23A1A5C7 686 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 PI4KAP2A4QPH2 592 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ADAM10O14672 748 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 RNASEH2AO75792 299 aaKnown RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 CCNDBP1O95273 360 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 CBX6O95503 412 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 SERPINC1P01008 464 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 IL1AP01583 271 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 CLEC3BP05452 202 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ARL3P36405 182 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 POLD2P49005 469 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 HARS2P49590 506 aaKnown RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 BLKP51451 505 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ARF3P61204 181 aaPredicted RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 ARF1P84077 181 aaKnown RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 ZBTB16Q05516 673 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 FOXD4Q12950 439 aaPredicted RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 PRKG2Q13237 762 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 EDRF1Q3B7T1 1238 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 EARS2Q5JPH6 523 aaKnown RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 KIAA1755Q5JYT7 1200 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ITPRIPL1Q6GPH6 555 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ISM2Q6H9L7 571 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 NAPEPLDQ6IQ20 393 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 C11orf87Q6NUJ2 197 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 TMEM81Q6P7N7 255 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 B4GALNT4Q76KP1 1039 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ADGRF4Q8IZF3 695 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 NGEFQ8N5V2 710 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ARL14EPQ8N8R7 260 aaPredicted RBP4.31□□□□□ -1.72
SMC4-225ENST00000497203 ANKRD52Q8NB46 1076 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 ZMIZ2Q8NF64 920 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 METTL6Q8TCB7 284 aa4.31□□□□□ -1.72
SMC4-225ENST00000497203 FAR1Q8WVX9 515 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms