RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 NEBLO76041 1014 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 CD160O95971 181 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 DCNP07585 359 aaKnown RBP18.68■□□□□ 0.58
TSSC4-210ENST00000496468 RBP3P10745 1247 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 HLA-EP13747 358 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 HOXB2P14652 356 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 VAV1P15498 845 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 AOC1P19801 751 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 WASP42768 502 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 FZD5Q13467 585 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 SIX1Q15475 284 aaPredicted RBP18.68■□□□□ 0.58
TSSC4-210ENST00000496468 ACCSLQ4AC99 568 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 INO80DQ53TQ3 878 aaPredicted RBP18.68■□□□□ 0.58
TSSC4-210ENST00000496468 EOGTQ5NDL2 527 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 BBS5Q8N3I7 341 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 ZNF366Q8N895 744 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 FATE1Q969F0 183 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 GABRG3Q99928 467 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 IER2Q9BTL4 223 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 SEPT10Q9P0V9 454 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 SLCO3A1Q9UIG8 710 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 MMP17Q9ULZ9 603 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 EDDM13A0A1B0GTR0 161 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 TTC34A8MYJ7 566 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 MATN3O15232 486 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 SMAD6O43541 496 aaKnown RBP18.67■□□□□ 0.58
TSSC4-210ENST00000496468 ATG13O75143 517 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 ZNF189O75820 626 aaPredicted RBP18.67■□□□□ 0.58
TSSC4-210ENST00000496468 PEX11BO96011 259 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 EPHX1P07099 455 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 RHOAP61586 193 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 ENPP2Q13822 863 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 LBRQ14739 615 aaKnown RBP18.67■□□□□ 0.58
TSSC4-210ENST00000496468 STARD3Q14849 445 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 DLG2Q15700 870 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 HNRNPA1L2Q32P51 320 aaKnown RBP18.67■□□□□ 0.58
TSSC4-210ENST00000496468 HEATR6Q6AI08 1181 aaKnown RBP18.67■□□□□ 0.58
TSSC4-210ENST00000496468 PKN3Q6P5Z2 889 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 Q6ZVU0 165 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 B4GALNT4Q76KP1 1039 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 PCDH20Q8N6Y1 951 aaKnown RBP18.67■□□□□ 0.58
TSSC4-210ENST00000496468 C1orf54Q8WWF1 131 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 MAML1Q92585 1016 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 PBXIP1Q96AQ6 731 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 CCDC114Q96M63 670 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 FERMT1Q9BQL6 677 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 EPHX3Q9H6B9 360 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 HAUS2Q9NVX0 235 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 SEPT3Q9UH03 358 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 CKAP5Q14008 2032 aa18.67■□□□□ 0.58
TSSC4-210ENST00000496468 CHURC1-FNTBB4DL54 471 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 SGK1O00141 431 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 KCNK1O00180 336 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 MTSS1O43312 755 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 LIASO43766 372 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 SYNCRIPO60506 623 aaKnown RBP18.66■□□□□ 0.58
TSSC4-210ENST00000496468 ADAM23O75077 832 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 PAFAH1B1P43034 410 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 MMP13P45452 471 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 RENBPP51606 427 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 IFI35P80217 286 aaPredicted RBP18.66■□□□□ 0.58
TSSC4-210ENST00000496468 HNRNPDQ14103 355 aaKnown RBP18.66■□□□□ 0.58
TSSC4-210ENST00000496468 MARC1Q5VT66 337 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 DARS2Q6PI48 645 aaKnown RBP18.66■□□□□ 0.58
TSSC4-210ENST00000496468 KIF18AQ8NI77 898 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 SLC35B2Q8TB61 432 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 FRS2Q8WU20 508 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 ISG20Q96AZ6 181 aaKnown RBP18.66■□□□□ 0.58
TSSC4-210ENST00000496468 AP1M1Q9BXS5 423 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 TM6SF2Q9BZW4 377 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 TNKS2Q9H2K2 1166 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 HOMER3Q9NSC5 361 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 RNF14Q9UBS8 474 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 DNPEPQ9ULA0 475 aa18.66■□□□□ 0.58
TSSC4-210ENST00000496468 WASH3PC4AMC7 463 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 KRIT1O00522 736 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 BNIP3LO60238 219 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 ZNF500O60304 480 aaPredicted RBP18.65■□□□□ 0.58
TSSC4-210ENST00000496468 URI1O94763 535 aaPredicted RBP18.65■□□□□ 0.58
TSSC4-210ENST00000496468 IGSF6O95976 241 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 CCNB1P14635 433 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 RECQLP46063 649 aaPredicted RBP18.65■□□□□ 0.58
TSSC4-210ENST00000496468 CLCN5P51795 746 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 SLC10A7Q0GE19 358 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 ZBTB17Q13105 803 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 BYSLQ13895 437 aaKnown RBP18.65■□□□□ 0.58
TSSC4-210ENST00000496468 GAS6Q14393 721 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 CCNG2Q16589 344 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 CREG2Q8IUH2 290 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 HTR3CQ8WXA8 447 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 NKD2Q969F2 451 aaPredicted RBP18.65■□□□□ 0.58
TSSC4-210ENST00000496468 EXOC2Q96KP1 924 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 GDAP1L1Q96MZ0 367 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 LHX3Q9UBR4 397 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 SUN2Q9UH99 717 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 TTLL3Q9Y4R7 772 aa18.65■□□□□ 0.58
TSSC4-210ENST00000496468 BCLAF3A2AJT9 711 aaKnown RBP18.64■□□□□ 0.57
TSSC4-210ENST00000496468 CFAP69A5D8W1 941 aa18.64■□□□□ 0.57
TSSC4-210ENST00000496468 RNF103O00237 685 aa18.64■□□□□ 0.57
TSSC4-210ENST00000496468 KCNN4O15554 427 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms