RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 PTCH2Q9Y6C5 1203 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 G3V2L1 256 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 ZBTB14O43829 449 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 HLA-DQB2P05538 268 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 PBX3P40426 434 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 GRIA4P48058 902 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 SCAPQ12770 1279 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 EFEMP1Q12805 493 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 TSNAXIP1Q2TAA8 658 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 PPM1LQ5SGD2 360 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 ZNF470Q6ECI4 717 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 SERINC5Q86VE9 423 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 CEP97Q8IW35 865 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 DEFB107AQ8IZN7 70 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 APBB2Q92870 758 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 ELMO2Q96JJ3 720 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 TSNARE1Q96NA8 513 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 TBL1YQ9BQ87 522 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 TRPV6Q9H1D0 765 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
CDCA7-208ENST00000496441 TDRD15B5MCY1 1934 aaKnown RBP11.71□□□□□ -0.53
CDCA7-208ENST00000496441 CFLARO15519 480 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 MT-CO1P00395 513 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 JUNP05412 331 aaKnown RBP11.71□□□□□ -0.53
CDCA7-208ENST00000496441 CCR1P32246 355 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 PEX19P40855 299 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.53
CDCA7-208ENST00000496441 COPAP53621 1224 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 SLC34A1Q06495 639 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 LPIN1Q14693 890 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 ZNF789Q5FWF6 425 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 C6orf163Q5TEZ5 329 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 ISLR2Q6UXK2 745 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 FRMD7Q6ZUT3 714 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 HPS6Q86YV9 775 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDCA7-208ENST00000496441 THEM5Q8N1Q8 247 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 ENDOVQ8N8Q3 282 aaKnown RBP11.71□□□□□ -0.53
CDCA7-208ENST00000496441 SNX31Q8N9S9 440 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 ATAD1Q8NBU5 361 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 NXNL1Q96CM4 212 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 SPDL1Q96EA4 605 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 NT5MQ9NPB1 228 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 DNAJB4Q9UDY4 337 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 PPM1HQ9ULR3 514 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 SOX13Q9UN79 622 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 SCN4AP35499 1836 aa11.71□□□□□ -0.53
CDCA7-208ENST00000496441 J3KR12 359 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 TRIM13O60858 407 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 PIGNO95427 931 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 SLC4A1P02730 911 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 PIRTP0C851 137 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 TSPAN8P19075 237 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 VHLP40337 213 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 PRKCZQ05513 592 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 CYS1Q717R9 158 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 PTAR1Q7Z6K3 402 aaPredicted RBP11.71□□□□□ -0.54
CDCA7-208ENST00000496441 XPR1Q9UBH6 696 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 HCSTQ9UBK5 93 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 TRHDEQ9UKU6 1024 aa11.71□□□□□ -0.54
CDCA7-208ENST00000496441 MTF2Q9Y483 593 aaPredicted RBP11.71□□□□□ -0.54
CDCA7-208ENST00000496441 IRAK2O43187 625 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 MAFKO60675 156 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 TM7SF2O76062 418 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 CNTN5O94779 1100 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 DDHD2O94830 711 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 IL1BP01584 269 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 HNRNPLP14866 589 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDCA7-208ENST00000496441 GRK2P25098 689 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 USP46P62068 366 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 PSMD5Q16401 504 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 ARL13AQ5H913 290 aaPredicted RBP11.7□□□□□ -0.54
CDCA7-208ENST00000496441 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 CD300LGQ6UXG3 332 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 SCD5Q86SK9 330 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 ZC3HC1Q86WB0 502 aaKnown RBP11.7□□□□□ -0.54
CDCA7-208ENST00000496441 ARHGAP12Q8IWW6 846 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 FSTL5Q8N475 847 aaPredicted RBP11.7□□□□□ -0.54
CDCA7-208ENST00000496441 EXT2Q93063 718 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 MIEF2Q96C03 454 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 DDX50Q9BQ39 737 aaKnown RBP11.7□□□□□ -0.54
CDCA7-208ENST00000496441 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 FNDC3AQ9Y2H6 1198 aaKnown RBP11.7□□□□□ -0.54
CDCA7-208ENST00000496441 SF3B1O75533 1304 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDCA7-208ENST00000496441 A0A0U1RQF3 1178 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 NT5C1B-RDH14C9J2C7 533 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 E9PAM4 449 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 TIMM44O43615 452 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 RPL9P32969 192 aaKnown RBP11.7□□□□□ -0.54
CDCA7-208ENST00000496441 SLC1A2P43004 574 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 TUSC3Q13454 348 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 CSHL1Q14406 222 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 PTPRCAPQ14761 206 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 CCDC153Q494R4 210 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 PM20D1Q6GTS8 502 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 ANO7Q6IWH7 933 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 FAM171BQ6P995 826 aa11.7□□□□□ -0.54
CDCA7-208ENST00000496441 MFSD6LQ8IWD5 586 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms