RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 ACTL7AQ9Y615 435 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 ASCC3Q8N3C0 2202 aaKnown RBP12.09□□□□□ -0.47
THBS3-208ENST00000496332 GOLGA6L19H0YKK7 550 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 RNF103O00237 685 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 DDX3XO00571 662 aaKnown RBP eCLIP12.08□□□□□ -0.48
THBS3-208ENST00000496332 WNT9AO14904 365 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 VILLO15195 856 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 RAMP2O60895 175 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 CD160O95971 181 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 PRNPP04156 253 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 SKILP12757 684 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 DESP17661 470 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 EPHB2P29323 1055 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 CTSKP43235 329 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 DNA2P51530 1060 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 UBASH3AP57075 661 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 C21orf59P57076 290 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 HNRNPDQ14103 355 aaKnown RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 POLD3Q15054 466 aaPredicted RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 TRIP6Q15654 476 aaKnown RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 CARD16Q5EG05 197 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 FIGNQ5HY92 759 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 PLEKHA7Q6IQ23 1121 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 DPY19L3Q6ZPD9 716 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 PRPF39Q86UA1 669 aaKnown RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 SETD7Q8WTS6 366 aaKnown RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 ARRDC3Q96B67 414 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 SERAC1Q96JX3 654 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 MAGEH1Q9H213 219 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 DYRK4Q9NR20 520 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 IL36AQ9UHA7 158 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 TPX2Q9ULW0 747 aaKnown RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
THBS3-208ENST00000496332 PCDHB9Q9Y5E1 797 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 CACNA1EQ15878 2313 aa12.08□□□□□ -0.48
THBS3-208ENST00000496332 CXorf51AA0A1B0GTR3 108 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 A0A1W2PR77 199 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 TMEM191CA6NGB0 347 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 H0Y8X5 98 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 LATO43561 262 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 CREB3O43889 395 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 LEFTY1O75610 366 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 TOP3BO95985 862 aaKnown RBP12.07□□□□□ -0.48
THBS3-208ENST00000496332 WNT1P04628 370 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 GZMAP12544 262 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 PSMA2P25787 234 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 CD38P28907 300 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 MAT2AP31153 395 aaKnown RBP12.07□□□□□ -0.48
THBS3-208ENST00000496332 PBX1P40424 430 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 AIF1P55008 147 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 TAS2R38P59533 333 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 SUZ12Q15022 739 aaKnown RBP12.07□□□□□ -0.48
THBS3-208ENST00000496332 ZSCAN23Q3MJ62 389 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 PIP5KL1Q5T9C9 394 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 LEKR1Q6ZMV7 388 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 PCDH20Q8N6Y1 951 aaKnown RBP12.07□□□□□ -0.48
THBS3-208ENST00000496332 RTL3Q8N8U3 475 aaKnown RBP12.07□□□□□ -0.48
THBS3-208ENST00000496332 GRIN3AQ8TCU5 1115 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 SKA1Q96BD8 255 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 EPAS1Q99814 870 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 ARHGAP20Q9P2F6 1191 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 PCOLCE2Q9UKZ9 415 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 HPCAL4Q9UM19 191 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 WASF3Q9UPY6 502 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 PCDHGB2Q9Y5G2 931 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 WASF2Q9Y6W5 498 aa12.07□□□□□ -0.48
THBS3-208ENST00000496332 NYNRINQ9P2P1 1898 aaKnown RBP12.06□□□□□ -0.48
THBS3-208ENST00000496332 A0A1W2PQJ5 194 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 KDELR3O43731 214 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 RNGTTO60942 597 aaKnown RBP12.06□□□□□ -0.48
THBS3-208ENST00000496332 CBFA2T3O75081 653 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 SPINK2P20155 84 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 NUDT1P36639 197 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 CCNHP51946 323 aaPredicted RBP12.06□□□□□ -0.48
THBS3-208ENST00000496332 GEMIN4P57678 1058 aaKnown RBP12.06□□□□□ -0.48
THBS3-208ENST00000496332 ZNF423Q2M1K9 1284 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 SLC45A4Q5BKX6 768 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 PRAMEF14Q5SWL7 426 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 NAPEPLDQ6IQ20 393 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 DBX2Q6ZNG2 339 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 ERN2Q76MJ5 926 aaKnown RBP12.06□□□□□ -0.48
THBS3-208ENST00000496332 TRIM69Q86WT6 500 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 RYBPQ8N488 228 aaPredicted RBP12.06□□□□□ -0.48
THBS3-208ENST00000496332 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 ISG20Q96AZ6 181 aaKnown RBP12.06□□□□□ -0.48
THBS3-208ENST00000496332 ZNF653Q96CK0 615 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 PPP1R16AQ96I34 528 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 HEPHQ9BQS7 1158 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 HDAC8Q9BY41 377 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 TM6SF2Q9BZW4 377 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 NOL6Q9H6R4 1146 aaKnown RBP12.06□□□□□ -0.48
THBS3-208ENST00000496332 CATSPERBQ9H7T0 1116 aa12.06□□□□□ -0.48
THBS3-208ENST00000496332 GPATCH2LQ9NWQ4 482 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms