RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 MTA2O94776 668 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 PROSCO94903 275 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 MT-CO1P00395 513 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 C7P10643 843 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 VAV1P15498 845 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 GOT1P17174 413 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 GLDCP23378 1020 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 MAN1A1P33908 653 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 NOP2P46087 812 aaKnown RBP16.7■□□□□ 0.26
SF3A1-209ENST00000496189 HCAR3P49019 387 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 ATXN3P54252 364 aaPredicted RBP16.7■□□□□ 0.26
SF3A1-209ENST00000496189 RAD51Q06609 339 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 SF3A2Q15428 464 aaKnown RBP16.7■□□□□ 0.26
SF3A1-209ENST00000496189 SMTNL2Q2TAL5 461 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 TRIM61Q5EBN2 209 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 RAD9BQ6WBX8 426 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 KIAA1328Q86T90 577 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 RYBPQ8N488 228 aaPredicted RBP16.7■□□□□ 0.26
SF3A1-209ENST00000496189 LZTR1Q8N653 840 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 ARFGAP1Q8N6T3 406 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 PIP4K2CQ8TBX8 421 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 ISG20Q96AZ6 181 aaKnown RBP16.7■□□□□ 0.26
SF3A1-209ENST00000496189 BTBD6Q96KE9 485 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 KCTD15Q96SI1 283 aaPredicted RBP16.7■□□□□ 0.26
SF3A1-209ENST00000496189 MIR1-1HGQ9H1L0 117 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 IL36AQ9UHA7 158 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 EVLQ9UI08 416 aaPredicted RBP16.7■□□□□ 0.26
SF3A1-209ENST00000496189 PILRBQ9UKJ0 227 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 GPR179Q6PRD1 2367 aa16.7■□□□□ 0.26
SF3A1-209ENST00000496189 ABCA7Q8IZY2 2146 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 A0A0A6YYK5 440 aaPredicted RBP16.69■□□□□ 0.26
SF3A1-209ENST00000496189 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.69■□□□□ 0.26
SF3A1-209ENST00000496189 METTL12A8MUP2 240 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 K7ERQ8 282 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 KPNA3O00505 521 aaPredicted RBP16.69■□□□□ 0.26
SF3A1-209ENST00000496189 SLC7A4O43246 635 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 ZMPSTE24O75844 475 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 KRT7P08729 469 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 CHRNA3P32297 505 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 ACSL1P33121 698 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 SERPINB6P35237 376 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 GJC1P36383 396 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 ID4P47928 161 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 SNRPD1P62314 119 aaKnown RBP16.69■□□□□ 0.26
SF3A1-209ENST00000496189 ARF5P84085 180 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 SERINC3Q13530 473 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 MESDQ14696 234 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 DPYSL2Q16555 572 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 CA9Q16790 459 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 ODF2Q5BJF6 829 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 CARD16Q5EG05 197 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 KCNT1Q5JUK3 1230 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 TMEM139Q8IV31 216 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 SLC41A1Q8IVJ1 513 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 MAP7D3Q8IWC1 876 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 TMIEQ8NEW7 156 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 OR14C36Q8NHC7 312 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 TNKS2Q9H2K2 1166 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 SMOC1Q9H4F8 434 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 OSGEPQ9NPF4 335 aa16.69■□□□□ 0.26
SF3A1-209ENST00000496189 FCF1Q9Y324 198 aaKnown RBP16.69■□□□□ 0.26
SF3A1-209ENST00000496189 NYNRINQ9P2P1 1898 aaKnown RBP16.68■□□□□ 0.26
SF3A1-209ENST00000496189 ARHGAP6O43182 974 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 SMAD6O43541 496 aaKnown RBP16.68■□□□□ 0.26
SF3A1-209ENST00000496189 FSBPO95073 299 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 SYPP08247 313 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 RARAP10276 462 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 ERCC2P18074 760 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 TGM1P22735 817 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 VAV2P52735 878 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 INO80DQ53TQ3 878 aaPredicted RBP16.68■□□□□ 0.26
SF3A1-209ENST00000496189 ARTNQ5T4W7 220 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 PEAR1Q5VY43 1037 aaPredicted RBP16.68■□□□□ 0.26
SF3A1-209ENST00000496189 SLC23A3Q6PIS1 610 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 TMCO3Q6UWJ1 677 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.68■□□□□ 0.26
SF3A1-209ENST00000496189 OR2A12Q8NGT7 310 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 OR2T34Q8NGX1 318 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 GRIN3AQ8TCU5 1115 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 HMCESQ96FZ2 354 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 HEPHQ9BQS7 1158 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 EDEM2Q9BV94 578 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 NEUROG2Q9H2A3 272 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 KDM4CQ9H3R0 1056 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 PPM1HQ9ULR3 514 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 SLC6A14Q9UN76 642 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 CEP192Q8TEP8 1941 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 GVINP1Q7Z2Y8 2422 aa16.68■□□□□ 0.26
SF3A1-209ENST00000496189 TBC1D3DA0A087WVF3 549 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 TBC1D3IA0A087WXS9 549 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 TBC1D3EA0A087X179 549 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 TBC1D3KA0A087X1G2 549 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 A0A1B0GTW7 788 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 TBC1D3FA6NER0 549 aaPredicted RBP16.67■□□□□ 0.26
SF3A1-209ENST00000496189 TMEM110-MUSTN1A8MSY1 372 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 TBC1D3LB9A6J9 549 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 DFFAO00273 331 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 IGSF6O95976 241 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 GSRP00390 522 aa16.67■□□□□ 0.26
SF3A1-209ENST00000496189 SERPINF2P08697 491 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms