RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	ISG20	Q96AZ6	181 aa	Known RBP	11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	ZNF653	Q96CK0	615 aa		11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	CCDC114	Q96M63	670 aa		11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	CEP44	Q9C0F1	390 aa		11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	TNKS2	Q9H2K2	1166 aa		11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	KDM4C	Q9H3R0	1056 aa		11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	LUC7L2	Q9Y383	392 aa	Known RBP	11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	ACTL7A	Q9Y615	435 aa		11.18	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3D	A0A087WVF3	549 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3I	A0A087WXS9	549 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643		A0A087X0T9	212 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3E	A0A087X179	549 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3K	A0A087X1G2	549 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643		A0A1B0GVT2	93 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3L	B9A6J9	549 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	LAT	O43561	262 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	KDELR3	O43731	214 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	CREB3	O43889	395 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	RAMP2	O60895	175 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	PRNP	P04156	253 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3H	P0C7X1	549 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	FAM228B	P0C875	321 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	ZNF883	P0CG24	379 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	DES	P17661	470 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	KCNA4	P22459	653 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	HNRNPH3	P31942	346 aa	Known RBP	11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	CASP14	P31944	242 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	HTR7	P34969	479 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TAS2R38	P59533	333 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	RACK1	P63244	317 aa	Known RBP	11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	POLD3	Q15054	466 aa	Predicted RBP	11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TEAD4	Q15561	434 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	CA9	Q16790	459 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	HLA-B	Q31612	363 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	POM121L1P	Q3SYA9	428 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TDRD12	Q587J7	1177 aa	Known RBP	11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	CARD16	Q5EG05	197 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	ARSI	Q5FYB1	569 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	KCNT1	Q5JUK3	1230 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	ERMARD	Q5T6L9	678 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	PIP5KL1	Q5T9C9	394 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3G	Q6DHY5	549 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3C	Q6IPX1	549 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	IL27RA	Q6UWB1	636 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	DPY19L3	Q6ZPD9	716 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	PLPP6	Q8IY26	295 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	DEFB124	Q8NES8	71 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	VOPP1	Q96AW1	172 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	ARRDC3	Q96B67	414 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TRIM11	Q96F44	468 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	PEBP4	Q96S96	227 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	EPAS1	Q99814	870 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TSPY26P	Q9H489	355 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	GAREM1	Q9H706	876 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	IL21R	Q9HBE5	538 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	GPATCH2L	Q9NWQ4	482 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	ARHGAP20	Q9P2F6	1191 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	IL36A	Q9UHA7	158 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	TPX2	Q9ULW0	747 aa	Known RBP	11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	ANKRD6	Q9Y2G4	727 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	FCF1	Q9Y324	198 aa	Known RBP	11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	SCIN	Q9Y6U3	715 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	WASF2	Q9Y6W5	498 aa		11.17	□□□□□ -0.62
DCTN1-223	ENST00000495643	EIF3CL	B5ME19	914 aa	Known RBP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	KPNA3	O00505	521 aa	Predicted RBP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	WNT9A	O14904	365 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	FGF10	O15520	208 aa	Predicted RBP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	LRCH4	O75427	683 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	LEFTY1	O75610	366 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	RNF8	O76064	485 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	CER1	O95813	267 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	MIP	P30301	263 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	GEMIN4	P57678	1058 aa	Known RBP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	YBEY	P58557	167 aa	Predicted RBP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	PPP2CB	P62714	309 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	PPP2CA	P67775	309 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	KIF19	Q2TAC6	998 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	LAYN	Q6UX15	382 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	DBX2	Q6ZNG2	339 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	TRIM69	Q86WT6	500 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	UMODL1-AS1	Q8N2C9	162 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	SLC6A18	Q96N87	628 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	EIF3C	Q99613	913 aa	Known RBP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	HEPH	Q9BQS7	1158 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	SNRNP25	Q9BV90	132 aa	Known RBP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	HDAC8	Q9BY41	377 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	KLC2	Q9H0B6	622 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	CATSPERB	Q9H7T0	1116 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	MRPL47	Q9HD33	250 aa	Known RBP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	MYO1A	Q9UBC5	1043 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	PCSK1N	Q9UHG2	260 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	HPCAL4	Q9UM19	191 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	NENF	Q9UMX5	172 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	AP4E1	Q9UPM8	1137 aa		11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
DCTN1-223	ENST00000495643	SNX11	Q9Y5W9	270 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms