RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 RTL3Q8N8U3 475 aaKnown RBP14.32□□□□□ -0.12
MRPL55-232ENST00000495434 EPAS1Q99814 870 aa14.32□□□□□ -0.12
MRPL55-232ENST00000495434 CATSPERBQ9H7T0 1116 aa14.32□□□□□ -0.12
MRPL55-232ENST00000495434 PREBQ9HCU5 417 aa14.32□□□□□ -0.12
MRPL55-232ENST00000495434 MRPL47Q9HD33 250 aaKnown RBP14.32□□□□□ -0.12
MRPL55-232ENST00000495434 NDFIP2Q9NV92 336 aa14.32□□□□□ -0.12
MRPL55-232ENST00000495434 DNAI1Q9UI46 699 aa14.32□□□□□ -0.12
MRPL55-232ENST00000495434 PCDHGB2Q9Y5G2 931 aa14.32□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3DA0A087WVF3 549 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3IA0A087WXS9 549 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3EA0A087X179 549 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3KA0A087X1G2 549 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 A0A1B0GVT2 93 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3FA6NER0 549 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3LB9A6J9 549 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 VILLO15195 856 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 FGF10O15520 208 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-232ENST00000495434 BNIP3LO60238 219 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 DFNA5O60443 496 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 RNF8O76064 485 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 CD160O95971 181 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 SERPING1P05155 500 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 CTSLP07711 333 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3HP0C7X1 549 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 KCNA4P22459 653 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 PSMA2P25787 234 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 PMLP29590 882 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 ACVRL1P37023 503 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 METAP1P53582 386 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 YBEYP58557 167 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-232ENST00000495434 SHC2P98077 582 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 CNTN1Q12860 1018 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 ACAP1Q15027 740 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 HLA-BQ31612 363 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3GQ6DHY5 549 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3CQ6IPX1 549 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 NEK5Q6P3R8 708 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 DBX2Q6ZNG2 339 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TRIM69Q86WT6 500 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
MRPL55-232ENST00000495434 TBC1D3Q8IZP1 549 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-232ENST00000495434 OR2I1PQ8NGU4 316 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 SKA1Q96BD8 255 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 GAREM1Q9H706 876 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 IFNKQ9P0W0 207 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 CNOT8Q9UFF9 292 aaKnown RBP14.31□□□□□ -0.12
MRPL55-232ENST00000495434 IL36AQ9UHA7 158 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 ANKRD6Q9Y2G4 727 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 LUC7L2Q9Y383 392 aaKnown RBP14.31□□□□□ -0.12
MRPL55-232ENST00000495434 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.31□□□□□ -0.12
MRPL55-232ENST00000495434 SLCO1B1Q9Y6L6 691 aa14.31□□□□□ -0.12
MRPL55-232ENST00000495434 CABIN1Q9Y6J0 2220 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 PLXNA2O75051 1894 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 GIPC1O14908 333 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 ATMINO43313 823 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-232ENST00000495434 KDELR3O43731 214 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 CREB3O43889 395 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 ZNF135P52742 658 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-232ENST00000495434 PARP15Q460N3 678 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 TDRD12Q587J7 1177 aaKnown RBP14.3□□□□□ -0.12
MRPL55-232ENST00000495434 CARD16Q5EG05 197 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 ERMARDQ5T6L9 678 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 DPY19L3Q6ZPD9 716 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 ADAT2Q7Z6V5 191 aaKnown RBP14.3□□□□□ -0.12
MRPL55-232ENST00000495434 PRPF39Q86UA1 669 aaKnown RBP14.3□□□□□ -0.12
MRPL55-232ENST00000495434 UMODL1-AS1Q8N2C9 162 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 ARFGAP1Q8N6T3 406 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 DEFB124Q8NES8 71 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 CASKIN2Q8WXE0 1202 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 ZNF653Q96CK0 615 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 PPP1R16AQ96I34 528 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 LRIG1Q96JA1 1093 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 HEPHQ9BQS7 1158 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 HDAC8Q9BY41 377 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 TNKS2Q9H2K2 1166 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 EBF2Q9HAK2 575 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 DYRK4Q9NR20 520 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 ARHGAP20Q9P2F6 1191 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 DMTF1Q9Y222 760 aa14.3□□□□□ -0.12
MRPL55-232ENST00000495434 PLK4O00444 970 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 KPNA3O00505 521 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-232ENST00000495434 LEFTY1O75610 366 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 GYPCP04921 128 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 CD38P28907 300 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 HNRNPH3P31942 346 aaKnown RBP14.29□□□□□ -0.12
MRPL55-232ENST00000495434 PCK1P35558 622 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 CTSKP43235 329 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 ZNF252P-AS1Q0IIN9 211 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 KIF19Q2TAC6 998 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 INO80DQ53TQ3 878 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-232ENST00000495434 SLC45A4Q5BKX6 768 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 ARSIQ5FYB1 569 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 PIP5KL1Q5T9C9 394 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 ERN2Q76MJ5 926 aaKnown RBP14.29□□□□□ -0.12
MRPL55-232ENST00000495434 CHST14Q8NCH0 376 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 NOL6Q9H6R4 1146 aaKnown RBP14.29□□□□□ -0.12
MRPL55-232ENST00000495434 TM7SF3Q9NS93 570 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 SNX11Q9Y5W9 270 aa14.29□□□□□ -0.12
MRPL55-232ENST00000495434 WASF2Q9Y6W5 498 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms