RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 MTA1Q13330 715 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 NCAPHQ15003 741 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 SYCP1Q15431 976 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 SFMBT2Q5VUG0 894 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 DPY19L3Q6ZPD9 716 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 TMPRSS7Q7RTY8 843 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 DSG4Q86SJ6 1040 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 SETD3Q86TU7 594 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-208ENST00000494728 TRIM69Q86WT6 500 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 CCDC185Q8N715 623 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 TMEM145Q8NBT3 493 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 RXFP2Q8WXD0 754 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 KLK6Q92876 244 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 C1orf74Q96LT6 269 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 CDC6Q99741 560 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 C2orf49Q9BVC5 232 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-208ENST00000494728 GDF3Q9NR23 364 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 FTSJ1Q9UET6 329 aa11.91□□□□□ -0.5
VTI1A-208ENST00000494728 FCF1Q9Y324 198 aaKnown RBP11.91□□□□□ -0.5
VTI1A-208ENST00000494728 C2CD4BA6NLJ0 364 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 LGALS16A8MUM7 142 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 C1QTNF3-AMACRE9PGA6 284 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 TNFSF14O43557 240 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 SDC3O75056 442 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 F9P00740 461 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 UNGP13051 313 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-208ENST00000494728 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-208ENST00000494728 GKP32189 559 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 ACVRL1P37023 503 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 SERPINH1P50454 418 aaKnown RBP11.9□□□□□ -0.5
VTI1A-208ENST00000494728 HDAC4P56524 1084 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 KRT83P78385 493 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 SFSWAPQ12872 951 aaKnown RBP11.9□□□□□ -0.5
VTI1A-208ENST00000494728 CAMK2BQ13554 666 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 CT47A1Q5JQC4 288 aaPredicted RBP11.9□□□□□ -0.5
VTI1A-208ENST00000494728 C6orf118Q5T5N4 469 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 SEL1L3Q68CR1 1132 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 DHRS13Q6UX07 377 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 KDM7AQ6ZMT4 941 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 ARCQ7LC44 396 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 NLRP14Q86W24 1093 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 ZNF677Q86XU0 584 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 HAPLN3Q96S86 360 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 ZYG11BQ9C0D3 744 aa11.9□□□□□ -0.5
VTI1A-208ENST00000494728 ZFR2Q9UPR6 939 aaKnown RBP11.9□□□□□ -0.5
VTI1A-208ENST00000494728 RP1P56715 2156 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 A0A1W2PQU0 124 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 TCRBV5S1A1TA0A578 114 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 ILVBLA1L0T0 632 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 SPINT1O43278 529 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 RNGTTO60942 597 aaKnown RBP11.89□□□□□ -0.51
VTI1A-208ENST00000494728 LEFTY1O75610 366 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 ATP1A3P13637 1013 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 RFC1P35251 1148 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-208ENST00000494728 ACADVLP49748 655 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 GNA12Q03113 381 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 FGL2Q14314 439 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 SUZ12Q15022 739 aaKnown RBP11.89□□□□□ -0.51
VTI1A-208ENST00000494728 SMAD1Q15797 465 aaKnown RBP11.89□□□□□ -0.51
VTI1A-208ENST00000494728 ZNF284Q2VY69 593 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 FAM46CQ5VWP2 391 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 LRSAM1Q6UWE0 723 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 LRRC31Q6UY01 552 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 LEKR1Q6ZMV7 388 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 MON1BQ7L1V2 547 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 SLC22A18ASQ8N1D0 253 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 EID2Q8N6I1 236 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 MFSD2AQ8NA29 543 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 OR6K2Q8NGY2 324 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 SPON2Q9BUD6 331 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 NOL6Q9H6R4 1146 aaKnown RBP11.89□□□□□ -0.51
VTI1A-208ENST00000494728 PREBQ9HCU5 417 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 ATP13A1Q9HD20 1204 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 IL36AQ9UHA7 158 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 LIMA1Q9UHB6 759 aaKnown RBP11.89□□□□□ -0.51
VTI1A-208ENST00000494728 GGT7Q9UJ14 662 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 PAXBP1Q9Y5B6 917 aa11.89□□□□□ -0.51
VTI1A-208ENST00000494728 ENC1O14682 589 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 SLC31A1O15431 190 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 LRIG2O94898 1065 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 ITGAVP06756 1048 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 SDC4P31431 198 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 ADRA1BP35368 520 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 ANP32AP39687 249 aaKnown RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 ABL2P42684 1182 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 PTPN9P43378 593 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 CLCN6P51797 869 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 CCNHP51946 323 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 GSCP56915 257 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 CLDN2P57739 230 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 MYL5Q02045 173 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 NRG1Q02297 640 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-208ENST00000494728 CLEC16AQ2KHT3 1053 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 KIF26BQ2KJY2 2108 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 TMEM259Q4ZIN3 620 aa11.88□□□□□ -0.51
VTI1A-208ENST00000494728 SETMARQ53H47 684 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms