RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 MORC3Q14149 939 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 CDKN3Q16667 212 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 ZNF284Q2VY69 593 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 C3orf38Q5JPI3 329 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 FAM102AQ5T9C2 384 aaPredicted RBP9.85□□□□□ -0.83
UBR4-216ENST00000494503 ARHGAP40Q5TG30 622 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 C22orf39Q6P5X5 142 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 OLFML1Q6UWY5 402 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 Q6ZSR6 202 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 ERN2Q76MJ5 926 aaKnown RBP9.85□□□□□ -0.83
UBR4-216ENST00000494503 KANSL1Q7Z3B3 1105 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 ZNF354CQ86Y25 554 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 DCBLD1Q8N8Z6 715 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 CHST14Q8NCH0 376 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 ZNF248Q8NDW4 579 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 OR2A12Q8NGT7 310 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 OR4C6Q8NH72 309 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 SNIP1Q8TAD8 396 aaKnown RBP9.85□□□□□ -0.83
UBR4-216ENST00000494503 ALG14Q96F25 216 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 APOLD1Q96LR9 279 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 ZDHHC6Q9H6R6 413 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 ATP13A1Q9HD20 1204 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 PIGVQ9NUD9 493 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 KLHL11Q9NVR0 708 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 ASNSD1Q9NWL6 643 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.85□□□□□ -0.838e-7■■□□□ 14.4
UBR4-216ENST00000494503 CNTN6Q9UQ52 1028 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 HS3ST2Q9Y278 367 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 PAXBP1Q9Y5B6 917 aa9.85□□□□□ -0.83
UBR4-216ENST00000494503 DOCK4Q8N1I0 1966 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 TEX51A0A1B0GUA7 166 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 GOLGA8SH3BPF8 625 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 KLK10O43240 276 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 OPA1O60313 960 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 LEFTY1O75610 366 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 TFE3P19532 575 aaPredicted RBP9.84□□□□□ -0.83
UBR4-216ENST00000494503 DUSP3P51452 185 aaPredicted RBP9.84□□□□□ -0.83
UBR4-216ENST00000494503 NEK3P51956 506 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 TMPRSS3P57727 454 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 HNRNPKP61978 463 aaKnown RBP eCLIP9.84□□□□□ -0.83
UBR4-216ENST00000494503 TLE3Q04726 772 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 SGCGQ13326 291 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 CAMK4Q16566 473 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 PTPN20Q4JDL3 420 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 TAF3Q5VWG9 929 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 RETSATQ6NUM9 610 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 NEK5Q6P3R8 708 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 CRTC1Q6UUV9 634 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 GCNT7Q6ZNI0 430 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 DPY19L3Q6ZPD9 716 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 SLC26A9Q7LBE3 791 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 SLC47A2Q86VL8 602 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 ERICH1Q86X53 443 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 DRC7Q8IY82 874 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 WDTC1Q8N5D0 677 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 DCAF4L2Q8NA75 395 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 TMEM145Q8NBT3 493 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 OR7D4Q8NG98 312 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 OR6K2Q8NGY2 324 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 IFI44Q8TCB0 444 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 LMX1AQ8TE12 382 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 KCNE4Q8WWG9 221 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 PSMB7Q99436 277 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.84□□□□□ -0.83
UBR4-216ENST00000494503 DUSP23Q9BVJ7 150 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 TM6SF2Q9BZW4 377 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 CPNE5Q9HCH3 593 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 TMPRSS4Q9NRS4 437 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 NLGN3Q9NZ94 848 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 DNAJC12Q9UKB3 198 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 TBC1D30Q9Y2I9 924 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 FCF1Q9Y324 198 aaKnown RBP9.84□□□□□ -0.83
UBR4-216ENST00000494503 ZNF462Q96JM2 2506 aa9.84□□□□□ -0.83
UBR4-216ENST00000494503 KIF26BQ2KJY2 2108 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 KALRNO60229 2985 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 RP1P56715 2156 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 TK2O00142 265 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 FPGTO14772 594 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 PAK4O96013 591 aaPredicted RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 CKMT1AP12532 417 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 ADRB3P13945 408 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 RBMS1P29558 406 aaKnown RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 CLCN6P51797 869 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 THOP1P52888 689 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 MARSP56192 900 aaKnown RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 RPS21P63220 83 aaKnown RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 CFHR1Q03591 330 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 PDE1CQ14123 709 aaPredicted RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 TCEA2Q15560 299 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 DEFB133Q30KQ1 61 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 C2CD6Q53TS8 623 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 HSP90AA4PQ58FG1 418 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 BRMS1LQ5PSV4 323 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 RWDD4Q6NW29 188 aaKnown RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 SETD3Q86TU7 594 aaPredicted RBP9.83□□□□□ -0.84
UBR4-216ENST00000494503 PARGQ86W56 976 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 LSMEM2Q8N112 164 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 SLC22A18ASQ8N1D0 253 aa9.83□□□□□ -0.84
UBR4-216ENST00000494503 TMEM35BQ8NCS4 154 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms