RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SENP1Q9P0U3 644 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 KLHL8Q9P2G9 620 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 RIMKLBQ9ULI2 386 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 ZFP37Q9Y6Q3 630 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 FAM169AQ9Y6X4 670 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 OBSL1O75147 1896 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 NOTCH4Q99466 2003 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 A0A0D9SEW6 157 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 ZCWPW2A0A1B0GU75 182 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 HMX2A2RU54 273 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 DFFAO00273 331 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 POLR3GO15318 223 aaPredicted RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 TYROBPO43914 113 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 LRG1P02750 347 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 HMBSP08397 361 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 MBL2P11226 248 aaPredicted RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 MYOGP15173 224 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 PGAM1P18669 254 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 ATP5DP30049 168 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 OR1E1P30953 314 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 STX2P32856 288 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 MDH1P40925 334 aaKnown RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 CSRP3P50461 194 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 SGSHP51688 502 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 GYS2P54840 703 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 GEMP55040 296 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 RPS24P62847 133 aaKnown RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 PPP2R2AP63151 447 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 SMAD3P84022 425 aaKnown RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 SLC18A2Q05940 514 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 NSUN2Q08J23 767 aaKnown RBP eCLIP6.91□□□□□ -1.3
MSH5-217ENST00000494458 NIPAL4Q0D2K0 466 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 SLC10A7Q0GE19 358 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 CDH17Q12864 832 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 DNAJC3Q13217 504 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 NAB1Q13506 487 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 MPP2Q14168 576 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 TAF12Q16514 161 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 KBTBD12Q3ZCT8 623 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 INO80DQ53TQ3 878 aaPredicted RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 PPM1LQ5SGD2 360 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 MARC1Q5VT66 337 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 NAPEPLDQ6IQ20 393 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 RFWD3Q6PCD5 774 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 OTOP3Q7RTS5 596 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 KIAA0907Q7Z7F0 614 aaPredicted RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 ANKMY2Q8IV38 441 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 PALM2Q8IXS6 379 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 MPP5Q8N3R9 675 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 PGBD5Q8N414 524 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 ARL14EPQ8N8R7 260 aaPredicted RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 SHKBP1Q8TBC3 707 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 MRPS31Q92665 395 aaKnown RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 PEX13Q92968 403 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 ISL2Q96A47 359 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 VOPP1Q96AW1 172 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 KCTD12Q96CX2 325 aaKnown RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 STAMBPL1Q96FJ0 436 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 AGAP3Q96P47 875 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 RANBP9Q96S59 729 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 MGME1Q9BQP7 344 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 CEP41Q9BYV8 373 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 PRKD2Q9BZL6 878 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 IL22Q9GZX6 179 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 TASP1Q9H6P5 420 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 SMYD2Q9NRG4 433 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 PSMC3IPQ9P2W1 217 aaPredicted RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 PRKAG3Q9UGI9 489 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 ZC3H7BQ9UGR2 993 aaKnown RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 DPP7Q9UHL4 492 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 RSPH14Q9UHP6 348 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 SOX13Q9UN79 622 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 CHMP2BQ9UQN3 213 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 CPQQ9Y646 472 aa6.91□□□□□ -1.3
MSH5-217ENST00000494458 NYNRINQ9P2P1 1898 aaKnown RBP6.91□□□□□ -1.3
MSH5-217ENST00000494458 TRAV19A0A0A6YYK7 116 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 EXOC1LA0A1B0GW35 172 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 GRXCR1A8MXD5 290 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 CXorf49A8MYA2 514 aaPredicted RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 LEFTY2O00292 366 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 MUSKO15146 869 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 PRPF4O43172 522 aaKnown RBP eCLIP6.9□□□□□ -1.3
MSH5-217ENST00000494458 SIN3BO75182 1162 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 USP1O94782 785 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 PAPSS2O95340 614 aaPredicted RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 PENKP01210 267 aaPredicted RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 CA3P07451 260 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 RHOP08100 348 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 EPCAMP16422 314 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 MGAT1P26572 445 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 BMP8BP34820 402 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 ACVRL1P37023 503 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 ETFBP38117 255 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 MAGEA10P43363 369 aaPredicted RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 ARCN1P48444 511 aaKnown RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 PRPSAP1Q14558 356 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 LBRQ14739 615 aaKnown RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 CRYMQ14894 314 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms