RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 RAB23Q9ULC3 237 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 FCF1Q9Y324 198 aaKnown RBP12.71□□□□□ -0.37
TRA2A-209ENST00000494255 ACTL7AQ9Y615 435 aa12.71□□□□□ -0.37
TRA2A-209ENST00000494255 EML5Q05BV3 1969 aa12.71□□□□□ -0.38
TRA2A-209ENST00000494255 MIF4GDA9UHW6 222 aaKnown RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 J3KR12 359 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 HRO43593 1189 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 MFSD11O43934 449 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 TMCC1O94876 653 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 CD160O95971 181 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 ADH1BP00325 375 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 CETN2P41208 172 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 P2RY2P41231 377 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 NBL1P41271 181 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 MARCKSL1P49006 195 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 RHOAP61586 193 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 RPS14P62263 151 aaKnown RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 NHLH1Q02575 133 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 IL10RBQ08334 325 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 PAFAH1B3Q15102 231 aaKnown RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 CST6Q15828 149 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 INO80DQ53TQ3 878 aaPredicted RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 NCBP2-AS2Q69YL0 99 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 SPOCD1Q6ZMY3 1216 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 C11orf74Q86VG3 221 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 MMAAQ8IVH4 418 aaKnown RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 PQLC3Q8N755 202 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 UBL4BQ8N7F7 174 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 NSMCE1Q8WV22 266 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 RLN3Q8WXF3 142 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 KRT35Q92764 455 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 SCML1Q9UN30 329 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 INVSQ9Y283 1065 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 PCDHA3Q9Y5H8 950 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 C1QTNF3-AMACRE9PGA6 284 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 MCF2LO15068 1137 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 MAP3K13O43283 966 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 FTCDO95954 541 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 IL1BP01584 269 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 MX2P20592 715 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 PSMD8P48556 350 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 RWDD2BP57060 319 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 SNRPD1P62314 119 aaKnown RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 SRSF5Q13243 272 aaKnown RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 TFDP2Q14188 446 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 SIM2Q14190 667 aaPredicted RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 CARD16Q5EG05 197 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 TFDP3Q5H9I0 405 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 FAM46CQ5VWP2 391 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 PRR23BQ6ZRT6 265 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 TP53INP2Q8IXH6 220 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 PLPP6Q8IY26 295 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 RYBPQ8N488 228 aaPredicted RBP12.7□□□□□ -0.38
TRA2A-209ENST00000494255 GANCQ8TET4 914 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 FAM129BQ96TA1 746 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 TM6SF2Q9BZW4 377 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 PDFQ9HBH1 243 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 ITM2CQ9NQX7 267 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 CYP8B1Q9UNU6 501 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 NCKAP1Q9Y2A7 1128 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 CAPN6Q9Y6Q1 641 aa12.7□□□□□ -0.38
TRA2A-209ENST00000494255 IGSF6O95976 241 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 GSRP00390 522 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 PRNPP04156 253 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 OXTRP30559 389 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 CHRNA3P32297 505 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 CDKN2BP42772 138 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 TPMTP51580 245 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 COPS2P61201 443 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 DYNLT1P63172 113 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 RFTN1Q14699 578 aaPredicted RBP12.69□□□□□ -0.38
TRA2A-209ENST00000494255 ELF2Q15723 593 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 MAP7D1Q3KQU3 841 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 TMCO4Q5TGY1 634 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 KAZNQ674X7 775 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 SLC9A4Q6AI14 798 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 SLC36A4Q6YBV0 504 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 DPY19L3Q6ZPD9 716 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 ARHGAP36Q6ZRI8 547 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 BBS5Q8N3I7 341 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 OR2AP1Q8NGE2 309 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 OR2A12Q8NGT7 310 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 GDAP1L1Q96MZ0 367 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 ZNF599Q96NL3 588 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 HEPHQ9BQS7 1158 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 CINPQ9BW66 212 aaPredicted RBP12.69□□□□□ -0.38
TRA2A-209ENST00000494255 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 PABPC3Q9H361 631 aaKnown RBP12.69□□□□□ -0.38
TRA2A-209ENST00000494255 KCNF1Q9H3M0 494 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 USP36Q9P275 1121 aaKnown RBP12.69□□□□□ -0.38
TRA2A-209ENST00000494255 IL36AQ9UHA7 158 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 HEY1Q9Y5J3 304 aa12.69□□□□□ -0.38
TRA2A-209ENST00000494255 PLXND1Q9Y4D7 1925 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 MID1O15344 667 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 NDUFS2O75306 463 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 POP4O95707 220 aaKnown RBP12.68□□□□□ -0.38
TRA2A-209ENST00000494255 C5AR1P21730 350 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms