RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ZNF423Q2M1K9 1284 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 C6orf118Q5T5N4 469 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 PIP5KL1Q5T9C9 394 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 MANEALQ5VSG8 457 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 E4F1Q66K89 784 aaPredicted RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 RWDD4Q6NW29 188 aaKnown RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 CAVIN1Q6NZI2 390 aaKnown RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 C22orf39Q6P5X5 142 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 IL27RAQ6UWB1 636 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 UNQ6494/PRO21346Q6UXR6 183 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 LEKR1Q6ZMV7 388 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 DPY19L3Q6ZPD9 716 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 MON1BQ7L1V2 547 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 IRF2BP2Q7Z5L9 587 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 ADAT2Q7Z6V5 191 aaKnown RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 NLRP14Q86W24 1093 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 MARCH9Q86YJ5 346 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 GATAD2AQ86YP4 633 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 NETO2Q8NC67 525 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 ANKRD20A12PQ8NF67 263 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 FAM172AQ8WUF8 416 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 BAP1Q92560 729 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 CENPIQ92674 756 aaPredicted RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 GATA6Q92908 595 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 SERAC1Q96JX3 654 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 NAP1L5Q96NT1 182 aaPredicted RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 PPP1R9BQ96SB3 815 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 KCNK17Q96T54 332 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 C2orf49Q9BVC5 232 aaPredicted RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 SELENOOQ9BVL4 669 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 ZYG11BQ9C0D3 744 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 OSBPL2Q9H1P3 480 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 ATP13A1Q9HD20 1204 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 TOR4AQ9NXH8 423 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 PPARGC1AQ9UBK2 798 aaKnown RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 OR12D3Q9UGF7 316 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 DNAI1Q9UI46 699 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 FCF1Q9Y324 198 aaKnown RBP8.73□□□□□ -1.01
LRCH3-219ENST00000494069 PAXBP1Q9Y5B6 917 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 PCDHB9Q9Y5E1 797 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 DOCK9Q9BZ29 2069 aa8.73□□□□□ -1.01
LRCH3-219ENST00000494069 USP24Q9UPU5 2620 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 A0A1B0GTQ1 180 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 SIGLEC16A6NMB1 481 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 TMCO5BA8MYB1 307 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 C1QTNF3-AMACRE9PGA6 284 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 KPNA3O00505 521 aaPredicted RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 SLC31A1O15431 190 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 CCP110O43303 1012 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 LATO43561 262 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 PLRG1O43660 514 aaKnown RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 PLEKP08567 350 aaPredicted RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 GPD1P21695 349 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 CD38P28907 300 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 PTPN9P43378 593 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 DNA2P51530 1060 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 GSCP56915 257 aaPredicted RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 C21orf59P57076 290 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 SFSWAPQ12872 951 aaKnown RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 FAM46CQ5VWP2 391 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 ACAD10Q6JQN1 1059 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 ADGRD1Q6QNK2 874 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 STRADAQ7RTN6 431 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 RAB44Q7Z6P3 723 aaPredicted RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 DSG4Q86SJ6 1040 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 SPATS2Q86XZ4 545 aaKnown RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 OR6K2Q8NGY2 324 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 BAHD1Q8TBE0 780 aaPredicted RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 GRIN3AQ8TCU5 1115 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 RHBDD1Q8TEB9 315 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 RNF166Q96A37 237 aaPredicted RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 VOPP1Q96AW1 172 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 MYOCQ99972 504 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 SYT11Q9BT88 431 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 FUCA2Q9BTY2 467 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 ACE2Q9BYF1 805 aaPredicted RBP8.72□□□□□ -1.01
LRCH3-219ENST00000494069 KLC2Q9H0B6 622 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 DAAM1Q9Y4D1 1078 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 NEUROG3Q9Y4Z2 214 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 PCDHGB2Q9Y5G2 931 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 WDFY3Q8IZQ1 3526 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 DOCK4Q8N1I0 1966 aa8.72□□□□□ -1.01
LRCH3-219ENST00000494069 A0A1W2PQU0 124 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 LRRC53A6NM62 1247 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 TLR4O00206 839 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 ALOX15BO15296 676 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 FLRT2O43155 660 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 SLC7A4O43246 635 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 RNGTTO60942 597 aaKnown RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 LEFTY1O75610 366 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 CALB1P05937 261 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 PRLRP16471 622 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 FERP16591 822 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 RHOQP17081 205 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 TNFAIP3P21580 790 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 SERPINH1P50454 418 aaKnown RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 CCT8P50990 548 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 NXPH1P58417 271 aa8.71□□□□□ -1.02
LRCH3-219ENST00000494069 NRG1Q02297 640 aaPredicted RBP8.71□□□□□ -1.02
LRCH3-219ENST00000494069 BNIP3Q12983 259 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms