RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ANKRD20A1Q5TYW2 823 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ANKRD20A3Q5VUR7 823 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 MSANTD2Q6P1R3 559 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 SLC23A3Q6PIS1 610 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 TRMT11Q7Z4G4 463 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ANKS1BQ7Z6G8 1248 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 PIP4P1Q86T03 277 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ADIPOR2Q86V24 386 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 C11orf74Q86VG3 221 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 TTC39CQ8N584 583 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 DDI1Q8WTU0 396 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CHMP6Q96FZ7 201 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 TOE1Q96GM8 510 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 FCRL2Q96LA5 508 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 PRICKLE1Q96MT3 831 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CAMK1GQ96NX5 476 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 CIPCQ9C0C6 399 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 RABEP2Q9H5N1 569 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 PPANQ9NQ55 473 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 GDF3Q9NR23 364 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ABCB8Q9NUT2 735 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 WSB2Q9NYS7 404 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 USP36Q9P275 1121 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 PDP2Q9P2J9 529 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 HESX1Q9UBX0 185 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 STOML2Q9UJZ1 356 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 RALYQ9UKM9 306 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 INTS6Q9UL03 887 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 STRIP2Q9ULQ0 834 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 GUCA1BQ9UMX6 200 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF232Q9UNY5 417 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 NAALADL1Q9UQQ1 740 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF510Q9Y2H8 683 aa8.4□□□□□ -1.06
HDAC6-234ENST00000493923 HBS1LQ9Y450 684 aaKnown RBP8.4□□□□□ -1.06
HDAC6-234ENST00000493923 TMEM131Q92545 1883 aa8.4□□□□□ -1.07
HDAC6-234ENST00000493923 FAM208BQ5VWN6 2430 aa8.4□□□□□ -1.07
HDAC6-234ENST00000493923 A0A1W2PQC6 194 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 FAM170AA1A519 330 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 GJB3O75712 270 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 ATP5HO75947 161 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 LTFP02788 710 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 GYPCP04921 128 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 C1QTNF9P0C862 333 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CD59P13987 128 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 IDO1P14902 403 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 TRIM21P19474 475 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SLC9A1P19634 815 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 TBXAS1P24557 533 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CHKAP35790 457 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CTSOP43234 321 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 GPD2P43304 727 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 RPL34P49207 117 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 TPMTP51580 245 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 RPS24P62847 133 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SHC2P98077 582 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 FOXC1Q12948 553 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CUL1Q13616 776 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 FSCBQ5H9T9 825 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 PIK3R6Q5UE93 754 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SYPL2Q5VXT5 272 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 DPY19L2P1Q6NXN4 242 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CCDC80Q76M96 950 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CHST9Q7L1S5 443 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 KIAA0907Q7Z7F0 614 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 TAC4Q86UU9 113 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 FAM124AQ86V42 546 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 HOOK3Q86VS8 718 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 TMPRSS6Q8IU80 811 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SCUBE3Q8IX30 993 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SIX6OS1Q8N1H7 587 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SCML4Q8N228 414 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 WDTC1Q8N5D0 677 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SPATA4Q8NEY3 305 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 DQX1Q8TE96 717 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 AGAP11Q8TF27 550 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 GFM2Q969S9 779 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 MYO19Q96H55 970 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 ZNF419Q96HQ0 510 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CDK5RAP1Q96SZ6 601 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 GTPBP2Q9BX10 602 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 GPR174Q9BXC1 333 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 RAB17Q9H0T7 212 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 STMN4Q9H169 189 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 PRDM16Q9HAZ2 1276 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 IL21RQ9HBE5 538 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 METTL14Q9HCE5 456 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CNGB3Q9NQW8 809 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 ITM2CQ9NQX7 267 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 DNAAF2Q9NVR5 837 aaKnown RBP8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SLC12A6Q9UHW9 1150 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SCOCQ9UIL1 159 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 ANGPTL2Q9UKU9 493 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 SLC6A14Q9UN76 642 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 CNTN6Q9UQ52 1028 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 LRRC42Q9Y546 428 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 LAMA5O15230 3695 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 PLXNB3Q9ULL4 1909 aa8.39□□□□□ -1.07
HDAC6-234ENST00000493923 ITPR1Q14643 2758 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms