RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ADAM5Q6NVV9 412 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 KCNJ9Q92806 393 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 MYD88Q99836 296 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 GDF15Q99988 308 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 HDHD5Q9BXW7 423 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 TRIM31Q9BZY9 425 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 NLRC4Q9NPP4 1024 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 IGHV4-28A0A0C4DH34 117 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 PIP5K1BO14986 540 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 NCK2O43639 380 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 FGF18O76093 207 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 HLA-DQA2P01906 255 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 AFPP02771 609 aaKnown RBP4.44□□□□□ -1.7
SMC4-223ENST00000493695 IFIT2P09913 472 aaKnown RBP4.44□□□□□ -1.7
SMC4-223ENST00000493695 TAF6P49848 677 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 RCAN1P53805 252 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 MYBPC2Q14324 1141 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 RAB30Q15771 203 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 ANKRD44Q8N8A2 993 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 ENDOVQ8N8Q3 282 aaKnown RBP4.44□□□□□ -1.7
SMC4-223ENST00000493695 DEPTORQ8TB45 409 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 PARD3BQ8TEW8 1205 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 IPO4Q8TEX9 1081 aaKnown RBP4.44□□□□□ -1.7
SMC4-223ENST00000493695 CD101Q93033 1021 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 CCDC138Q96M89 665 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 RIPOR3Q96MK2 946 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 UHRF2Q96PU4 802 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 PRPF18Q99633 342 aaKnown RBP4.44□□□□□ -1.7
SMC4-223ENST00000493695 ABHD16BQ9H3Z7 469 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 PCDHA10Q9Y5I2 948 aa4.44□□□□□ -1.7
SMC4-223ENST00000493695 IGLV5-37A0A075B6J1 123 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 C17orf102A2RUQ5 167 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 SERINC4A6NH21 518 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 DDTLA6NHG4 134 aaPredicted RBP4.43□□□□□ -1.7
SMC4-223ENST00000493695 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 DNPH1O43598 174 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 XPNPEP2O43895 674 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 MYL3P08590 195 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 FCGR2AP12318 317 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 CKMT1AP12532 417 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 TNFSF4P23510 183 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 CLCNKBP51801 687 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 ZACNQ401N2 412 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 XKR9Q5GH70 373 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 IZUMO3Q5VZ72 239 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 RNF144BQ7Z419 303 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 SRLQ86TD4 932 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 SPICE1Q8N0Z3 855 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 MAB21L3Q8N8X9 362 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 SECTM1Q8WVN6 248 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 RPS6KC1Q96S38 1066 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMC4-223ENST00000493695 Q9N2J8 555 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 NECTIN3Q9NQS3 549 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 AGO1Q9UL18 857 aaKnown RBP4.43□□□□□ -1.7
SMC4-223ENST00000493695 CNTN6Q9UQ52 1028 aa4.43□□□□□ -1.7
SMC4-223ENST00000493695 HNRNPDLO14979 420 aaKnown RBP4.42□□□□□ -1.7
SMC4-223ENST00000493695 SOX30O94993 753 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 MMP3P08254 477 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 GM2AP17900 193 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 PRPH2P23942 346 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 TYK2P29597 1187 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 PCP4P48539 62 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 ARL16Q0P5N6 197 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 BTBD16Q32M84 506 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 SYTL3Q4VX76 610 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 RHBDF2Q6PJF5 856 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 KIAA1324Q6UXG2 1013 aaKnown RBP4.42□□□□□ -1.7
SMC4-223ENST00000493695 GDPD4Q6W3E5 623 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 C9orf139Q6ZV77 190 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 FAM186BQ8IYM0 893 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 FAR1Q8WVX9 515 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 MTBPQ96DY7 904 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 TNIP3Q96KP6 325 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 PDE11AQ9HCR9 933 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 SEPSECSQ9HD40 501 aaKnown RBP4.42□□□□□ -1.7
SMC4-223ENST00000493695 SCRT2Q9NQ03 307 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 LIN7CQ9NUP9 197 aaKnown RBP4.42□□□□□ -1.7
SMC4-223ENST00000493695 SEL1LQ9UBV2 794 aa4.42□□□□□ -1.7
SMC4-223ENST00000493695 SLC38A8A6NNN8 435 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 PEX14O75381 377 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 LARGE1O95461 756 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 CLDN7O95471 211 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 PRKCHP24723 683 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 RPL3P39023 403 aaKnown RBP4.41□□□□□ -1.7
SMC4-223ENST00000493695 MXI1P50539 228 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 BTKQ06187 659 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 DMP1Q13316 513 aaPredicted RBP4.41□□□□□ -1.7
SMC4-223ENST00000493695 BIRC2Q13490 618 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 ALKBH1Q13686 389 aaKnown RBP4.41□□□□□ -1.7
SMC4-223ENST00000493695 KRT72Q14CN4 511 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 VWA5B1Q5TIE3 1220 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 TMEM268Q5VZI3 342 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 XRRA1Q6P2D8 792 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 ZNF771Q7L3S4 317 aaPredicted RBP4.41□□□□□ -1.7
SMC4-223ENST00000493695 TRMT1LQ7Z2T5 733 aaKnown RBP4.41□□□□□ -1.7
SMC4-223ENST00000493695 SERPINA11Q86U17 422 aa4.41□□□□□ -1.7
SMC4-223ENST00000493695 IL17RCQ8NAC3 791 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms