RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SCUBE3Q8IX30 993 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 PRPF19Q9UMS4 504 aaKnown RBP20.38■□□□□ 0.85
RNF40-203ENST00000493683 CXCL11O14625 94 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 WFS1O76024 890 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 TNNI3P19429 210 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 MAPK11Q15759 364 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 CERS2Q96G23 380 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 MTMR9Q96QG7 549 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 CEP41Q9BYV8 373 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 ABCA9Q8IUA7 1624 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 KCNK1O00180 336 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 SERPINA6P08185 405 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 SERPINA4P29622 427 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 SGCGQ13326 291 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 MAMLD1Q13495 774 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 STXBP5Q5T5C0 1151 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 ZSCAN18Q8TBC5 510 aaPredicted RBP20.37■□□□□ 0.85
RNF40-203ENST00000493683 GRIP2Q9C0E4 1043 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 NEK6Q9HC98 313 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 CCDC130P13994 396 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 ATP4AP20648 1035 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 PSMD4P55036 377 aaKnown RBP20.37■□□□□ 0.85
RNF40-203ENST00000493683 ZNF549Q6P9A3 640 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 TXNDC11Q6PKC3 985 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 EIF3MQ7L2H7 374 aaKnown RBP20.37■□□□□ 0.85
RNF40-203ENST00000493683 SH3BP5LQ7L8J4 393 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 ZFP28Q8NHY6 868 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 PYDC1Q8WXC3 89 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 C1QTNF7Q9BXJ2 289 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 TKTL2Q9H0I9 626 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 PLGRKTQ9HBL7 147 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 CCNB1IP1Q9NPC3 277 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 ARL15Q9NXU5 204 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 GNPTGQ9UJJ9 305 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 A0A0B4J269 797 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 E5RJQ4 531 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 QSOX1O00391 747 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 ACADMP11310 421 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 FMO4P31512 558 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 CBWD6Q4V339 395 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 MARK2Q7KZI7 788 aaKnown RBP20.37■□□□□ 0.85
RNF40-203ENST00000493683 LGI2Q8N0V4 545 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 UBASH3BQ8TF42 649 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 MYLPFQ96A32 169 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 OSBPL11Q9BXB4 747 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 FHDC1Q9C0D6 1143 aaPredicted RBP20.37■□□□□ 0.85
RNF40-203ENST00000493683 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 CLN6Q9NWW5 311 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 RAP2CQ9Y3L5 183 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 DDTLA6NHG4 134 aaPredicted RBP20.37■□□□□ 0.85
RNF40-203ENST00000493683 AHCYL1O43865 530 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 CYP20A1Q6UW02 462 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 SLC9A9Q8IVB4 645 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 RNF148Q8N7C7 305 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 MCRS1Q96EZ8 462 aa20.37■□□□□ 0.85
RNF40-203ENST00000493683 MRPL57Q9BQC6 102 aaKnown RBP20.37■□□□□ 0.85
RNF40-203ENST00000493683 UNKQ9C0B0 810 aaKnown RBP20.37■□□□□ 0.85
RNF40-203ENST00000493683 ACAT1P24752 427 aaKnown RBP20.36■□□□□ 0.85
RNF40-203ENST00000493683 PSME3P61289 254 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 FKBP1AP62942 108 aaKnown RBP20.36■□□□□ 0.85
RNF40-203ENST00000493683 DIP2AQ14689 1571 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 POMGNT2Q8NAT1 580 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 PNPLA3Q9NST1 481 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 ZMYM5Q9UJ78 669 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 PSME2Q9UL46 239 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 FGFR1P11362 822 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 ZNF655Q8N720 491 aaPredicted RBP20.36■□□□□ 0.85
RNF40-203ENST00000493683 SLC28A1O00337 649 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 MTA2O94776 668 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 PDK3Q15120 406 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 METTL3Q86U44 580 aaKnown RBP20.36■□□□□ 0.85
RNF40-203ENST00000493683 CDH24Q86UP0 819 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 YME1L1Q96TA2 773 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 ZNF670Q9BS34 389 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 PRDM8Q9NQV8 689 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 AK9Q5TCS8 1911 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 ATXN2Q99700 1313 aaKnown RBP20.36■□□□□ 0.85
RNF40-203ENST00000493683 ITGB6P18564 788 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 PAN2Q504Q3 1202 aaKnown RBP20.36■□□□□ 0.85
RNF40-203ENST00000493683 BHLHB9Q6PI77 547 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 AFTPHQ6ULP2 937 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 SEMA6AQ9H2E6 1030 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 PIGUQ9H490 435 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 SETD4Q9NVD3 440 aa20.36■□□□□ 0.85
RNF40-203ENST00000493683 PCDH8O95206 1070 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 ITGAXP20702 1163 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 PKNOX1P55347 436 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 C18orf25Q96B23 403 aaPredicted RBP20.35■□□□□ 0.85
RNF40-203ENST00000493683 PORCNQ9H237 461 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 ANGPT4Q9Y264 503 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 CCDC189A1A4V9 331 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 F8VP50 259 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 CYP7B1O75881 506 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 TGFB2P61812 414 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 PTSQ03393 145 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 ADGRA1Q86SQ6 560 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 PHF13Q86YI8 300 aaPredicted RBP20.35■□□□□ 0.85
RNF40-203ENST00000493683 ZNF671Q8TAW3 534 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 UROC1Q96N76 676 aa20.35■□□□□ 0.85
RNF40-203ENST00000493683 RACGAP1Q9H0H5 632 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms