RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 DBF4BQ8NFT6 615 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 STON2Q8WXE9 905 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 AZIN2Q96A70 460 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 E2F7Q96AV8 911 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 AGAP3Q96P47 875 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 RANBP9Q96S59 729 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 CEP41Q9BYV8 373 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 GPR62Q9BZJ7 368 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 ZYG11BQ9C0D3 744 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 SLC25A51Q9H1U9 297 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 STN1Q9H668 368 aaKnown RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 TLR8Q9NR97 1041 aaKnown RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 ABI2Q9NYB9 513 aaPredicted RBP10.93□□□□□ -0.66
USP4-214ENST00000491791 ZFATQ9P243 1243 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 SFMBT1Q9UHJ3 866 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 MSRAQ9UJ68 235 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 EMCNQ9ULC0 261 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 BACE2Q9Y5Z0 518 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 MYO16Q9Y6X6 1858 aa10.93□□□□□ -0.66
USP4-214ENST00000491791 GREB1Q4ZG55 1949 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 MTMR11A4FU01 709 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 PAPSS2O95340 614 aaPredicted RBP10.92□□□□□ -0.66
USP4-214ENST00000491791 PROCP04070 461 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 GALTP07902 379 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 OR4Q2P0C623 313 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 T-ENOLP0DO92 83 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 COL6A2P12110 1019 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 SLC11A1P49279 550 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 SERPINB8P50452 374 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 RENBPP51606 427 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 ARFIP2P53365 341 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 CRADDP78560 199 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 BST1Q10588 318 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 RAB30Q15771 203 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 FAM133BQ5BKY9 247 aaKnown RBP10.92□□□□□ -0.66
USP4-214ENST00000491791 MS4A13Q5J8X5 152 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 FAM182AQ5T1J6 154 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 MBLAC2Q68D91 279 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 SLC8B1Q6J4K2 584 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 RWDD4Q6NW29 188 aaKnown RBP10.92□□□□□ -0.66
USP4-214ENST00000491791 FUT10Q6P4F1 479 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 KDELC1Q6UW63 502 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 CLNKQ7Z7G1 428 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 C14orf80Q86SX3 495 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 RASSF3Q86WH2 238 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 NUDCD3Q8IVD9 361 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 SCN4BQ8IWT1 228 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 UNC5BQ8IZJ1 945 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 ABI1Q8IZP0 508 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 SKA1Q96BD8 255 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 TBL1YQ9BQ87 522 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 PRKD2Q9BZL6 878 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 SIK2Q9H0K1 926 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 C12orf65Q9H3J6 166 aaKnown RBP10.92□□□□□ -0.66
USP4-214ENST00000491791 FAM96AQ9H5X1 160 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 PRDM6Q9NQX0 595 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 THAP1Q9NVV9 213 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 IPO11Q9UI26 975 aaKnown RBP10.92□□□□□ -0.66
USP4-214ENST00000491791 SORCS3Q9UPU3 1222 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 ANKRD6Q9Y2G4 727 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 HBS1LQ9Y450 684 aaKnown RBP10.92□□□□□ -0.66
USP4-214ENST00000491791 PSAT1Q9Y617 370 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 DOCK4Q8N1I0 1966 aa10.92□□□□□ -0.66
USP4-214ENST00000491791 TANC1Q9C0D5 1861 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 MYO18AQ92614 2054 aaKnown RBP10.91□□□□□ -0.66
USP4-214ENST00000491791 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.91□□□□□ -0.66
USP4-214ENST00000491791 CARNS1A5YM72 827 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 TPP1O14773 563 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 MSI1O43347 362 aaKnown RBP10.91□□□□□ -0.66
USP4-214ENST00000491791 WFS1O76024 890 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 ERVK-10P10266 1014 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 CSF2RAP15509 400 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 ALOX15P16050 662 aaPredicted RBP10.91□□□□□ -0.66
USP4-214ENST00000491791 ARCN1P48444 511 aaKnown RBP10.91□□□□□ -0.66
USP4-214ENST00000491791 MAPKAPK2P49137 400 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 PRKAA2P54646 552 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 USP46P62068 366 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 IL10RBQ08334 325 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 MSLNQ13421 630 aaPredicted RBP10.91□□□□□ -0.66
USP4-214ENST00000491791 DDR2Q16832 855 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 UGP2Q16851 508 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 PARP15Q460N3 678 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 TMEM240Q5SV17 173 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 CERCAMQ5T4B2 595 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 ALG1LQ6GMV1 187 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 KIAA0930Q6ICG6 404 aaPredicted RBP10.91□□□□□ -0.66
USP4-214ENST00000491791 ARHGAP36Q6ZRI8 547 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 KIAA0408Q6ZU52 694 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 OTOP3Q7RTS5 596 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 PARP9Q8IXQ6 854 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 DNAAF3Q8N9W5 541 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 NETO2Q8NC67 525 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 CFAP61Q8NHU2 1237 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 RDH11Q8TC12 318 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 PEX13Q92968 403 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 ZNF669Q96BR6 464 aaPredicted RBP10.91□□□□□ -0.66
USP4-214ENST00000491791 KLHL29Q96CT2 875 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 ERP27Q96DN0 273 aa10.91□□□□□ -0.66
USP4-214ENST00000491791 IMP4Q96G21 291 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms