RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TMEM215Q68D42 235 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 RNF43Q68DV7 783 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 TLDC1Q6P9B6 456 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ARCQ7LC44 396 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 EXOC3L1Q86VI1 746 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 SLC13A5Q86YT5 568 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 MCOLN2Q8IZK6 566 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 CFAP52Q8N1V2 620 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 RXFP2Q8WXD0 754 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 PGAP3Q96FM1 320 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 BTN2A3PQ96KV6 586 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ACOX2Q99424 681 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ABCF3Q9NUQ8 709 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 SLC27A6Q9Y2P4 619 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 SNX10Q9Y5X0 201 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 C2CD4BA6NLJ0 364 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 SGK1O00141 431 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 SPOPO43791 374 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ADAM23O75077 832 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 KLF8O95600 359 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 APOEP02649 317 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 GZMAP12544 262 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 TACR2P21452 398 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 HLA-FP30511 346 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 CCR1P32246 355 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 RFC1P35251 1148 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 MARCKSL1P49006 195 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 PXNP49023 591 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 CXCR3P49682 368 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 C1QBPQ07021 282 aaKnown RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 SF3A3Q12874 501 aaKnown RBP eCLIP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 PPP2R5DQ14738 602 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ZNF528Q3MIS6 628 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 EGFLAMQ63HQ2 1017 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 TMEM92Q6UXU6 159 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 SYT13Q7L8C5 426 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 CCDC25Q86WR0 208 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 LGI2Q8N0V4 545 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ATP6V0D2Q8N8Y2 350 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 C12orf50Q8NA57 414 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 TXNDC5Q8NBS9 432 aaKnown RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ARHGEF2Q92974 986 aaKnown RBP9.63□□□□□ -0.87
BRCA1-219ENST00000491747 RNF34Q969K3 372 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 ARHGEF38Q9NXL2 777 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 STARD13Q9Y3M8 1113 aa9.63□□□□□ -0.87
BRCA1-219ENST00000491747 DOCK4Q8N1I0 1966 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 TMEM120BA0PK00 339 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 ATMINO43313 823 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-219ENST00000491747 ATG13O75143 517 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 ENDOD1O94919 500 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 UBOX5O94941 541 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 CALB1P05937 261 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 RPSAP08865 295 aaKnown RBP9.62□□□□□ -0.87
BRCA1-219ENST00000491747 PYGMP11217 842 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 NQO1P15559 274 aaKnown RBP9.62□□□□□ -0.87
BRCA1-219ENST00000491747 RRM1P23921 792 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 NBL1P41271 181 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 WASP42768 502 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 FNTBP49356 437 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 RPL7AP62424 266 aaKnown RBP9.62□□□□□ -0.87
BRCA1-219ENST00000491747 MRPS21P82921 87 aaKnown RBP9.62□□□□□ -0.87
BRCA1-219ENST00000491747 ATP11AP98196 1134 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 DEUP1Q05D60 604 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 DMC1Q14565 340 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 CCDC38Q502W7 563 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 HEATR6Q6AI08 1181 aaKnown RBP9.62□□□□□ -0.87
BRCA1-219ENST00000491747 C14orf80Q86SX3 495 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 ZBTB44Q8NCP5 570 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 SLCO2A1Q92959 643 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 IGSF8Q969P0 613 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 KLHL29Q96CT2 875 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 LMLNQ96KR4 655 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 HHIPQ96QV1 700 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 MAGEB5Q9BZ81 275 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 TKTL2Q9H0I9 626 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 CDC42EP4Q9H3Q1 356 aaKnown RBP9.62□□□□□ -0.87
BRCA1-219ENST00000491747 BATF3Q9NR55 127 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 RRN3Q9NYV6 651 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 NOP53Q9NZM5 478 aaKnown RBP9.62□□□□□ -0.87
BRCA1-219ENST00000491747 WHRNQ9P202 907 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 STAP1Q9ULZ2 295 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 MMP17Q9ULZ9 603 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 HS3ST4Q9Y661 456 aa9.62□□□□□ -0.87
BRCA1-219ENST00000491747 SIGLEC16A6NMB1 481 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 TCP11X1B4DZS4 312 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 WASH3PC4AMC7 463 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 PAGE1O75459 146 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 RARAP10276 462 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 KRT3P12035 628 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 PDGFRAP16234 1089 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 CD70P32970 193 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 PLA2G5P39877 138 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 RWDD2BP57060 319 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 COPS2P61201 443 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 NCALDP61601 193 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 CDO1Q16878 200 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 LONRF1Q17RB8 773 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 GALNTL6Q49A17 601 aa9.61□□□□□ -0.87
BRCA1-219ENST00000491747 FSCBQ5H9T9 825 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms