RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CD72P21854 359 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 TNFSF8P32971 234 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 DPP6P42658 865 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 PTPN9P43378 593 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 ENTPD1P49961 510 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 CCT4P50991 539 aaKnown RBP5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 CCR5P51681 352 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 MAPK7Q13164 816 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 TWIST1Q15672 202 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 SLC18A3Q16572 532 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 EDRF1Q3B7T1 1238 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 SYTL3Q4VX76 610 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 ALFQ53S48 1182 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 NUGGCQ68CJ6 796 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 SLC22A25Q6T423 547 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 PARM1Q6UWI2 310 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 PALB2Q86YC2 1186 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 SETD9Q8NE22 299 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 MSI2Q96DH6 328 aaKnown RBP5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 TBATAQ96M53 351 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 ZNF48Q96MX3 618 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 FAM234AQ9H0X4 552 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 EPHX3Q9H6B9 360 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 TMEM160Q9NX00 188 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 PLEKHB1Q9UF11 243 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 SLC13A4Q9UKG4 626 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 HSF4Q9ULV5 492 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 MST1RQ04912 1400 aa5.23□□□□□ -1.57
HMGB1P38-201ENST00000490557 A0A096LPK6 155 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 DDTLA6NHG4 134 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 PER2O15055 1255 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 HOXC11O43248 304 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 ATG13O75143 517 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 SERPINC1P01008 464 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 IGKV2-30P06310 120 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 MMP3P08254 477 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 CDC25AP30304 524 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 TDGQ13569 410 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 GPR68Q15743 365 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 Q5PR19 223 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 NAA35Q5VZE5 725 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 IL20RBQ6UXL0 311 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 IRF2BP2Q7Z5L9 587 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 CHD1LQ86WJ1 897 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 TMC8Q8IU68 726 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 ESX1Q8N693 406 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 ZNF366Q8N895 744 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 TNIP2Q8NFZ5 429 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 SCARB1Q8WTV0 552 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 ATOH1Q92858 354 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 HVCN1Q96D96 273 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 EYA3Q99504 573 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 ISCUQ9H1K1 167 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 CXorf56Q9H5V9 222 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 MAP6D1Q9H9H5 199 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 IFT80Q9P2H3 777 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 NLKQ9UBE8 527 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 TBX20Q9UMR3 447 aa5.22□□□□□ -1.57
HMGB1P38-201ENST00000490557 A0A0A0MQY5 61 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 C17orf100A8MU93 164 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 STMND1H3BQB6 276 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 INO80B-WBP1J3KQ70 363 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 CEP104O60308 925 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 ADAP00813 363 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 CRYABP02511 175 aaKnown RBP5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 CYP1A2P05177 515 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 HNRNPA1P09651 372 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 MYZAPP0CAP1 466 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 AVPR1AP37288 418 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 GPR12P47775 334 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 GPR18Q14330 331 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 ZNF260Q3ZCT1 412 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 WASHC2DQ5SRD0 308 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 DAB2IPQ5VWQ8 1189 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 NCAPH2Q6IBW4 605 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 NAPEPLDQ6IQ20 393 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 HEPHL1Q6MZM0 1159 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 SLC16A12Q6ZSM3 486 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 SERPINA11Q86U17 422 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 GPSM1Q86YR5 675 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 ZDHHC23Q8IYP9 409 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 PAF1Q8N7H5 531 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 LSM14AQ8ND56 463 aaKnown RBP5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 RAB40AQ8WXH6 277 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 INTS2Q9H0H0 1204 aaKnown RBP5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 SLC32A1Q9H598 525 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 KRCC1Q9NPI7 259 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 SIRT3Q9NTG7 399 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 ATP8A2Q9NTI2 1148 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 ZBTB40Q9NUA8 1239 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 GGA3Q9NZ52 723 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 C9orf78Q9NZ63 289 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 IL1RAPL1Q9NZN1 696 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 SEL1LQ9UBV2 794 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 CRYL1Q9Y2S2 319 aa5.21□□□□□ -1.58
HMGB1P38-201ENST00000490557 RPS10-NUDT3A0A1W2PQS6 291 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 ARHGAP10A1A4S6 786 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 FAM90A7PA6NKC0 464 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 FAM90A22PA8MWA6 464 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms