RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, human

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN4-208	ENST00000490417	CSRP1	P21291	193 aa	Known RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	MAOB	P27338	520 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	EPHB2	P29323	1055 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	SUZ12	Q15022	739 aa	Known RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	ACAP1	Q15027	740 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	POLD3	Q15054	466 aa	Predicted RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	SH3PXD2A	Q5TCZ1	1133 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	KIAA0895L	Q68EN5	471 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3G	Q6DHY5	549 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3C	Q6IPX1	549 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	PLEKHA7	Q6IQ23	1121 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	PSTK	Q8IV42	348 aa	Known RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	DRC7	Q8IY82	874 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	ZCCHC9	Q8N567	271 aa	Known RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	PCDH20	Q8N6Y1	951 aa	Known RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	TMIE	Q8NEW7	156 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	CPLX3	Q8WVH0	158 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	CASKIN2	Q8WXE0	1202 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	ZNF653	Q96CK0	615 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	USB1	Q9BQ65	265 aa	Known RBP	13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	ANP32E	Q9BTT0	268 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	NEUROG2	Q9H2A3	272 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	RXFP3	Q9NSD7	469 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	PLA2G2E	Q9NZK7	142 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	IFNK	Q9P0W0	207 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	SNX10	Q9Y5X0	201 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417	DNAH14	Q0VDD8	3507 aa		13.89	□□□□□ -0.19
SFXN4-208	ENST00000490417		A0A0D9SEW6	157 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	TCRBV5S1A1T	A0A578	114 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	UPK3BL1	B0FP48	263 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	UPK3BL2	E5RIL1	263 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417		I6L893	689 aa	Predicted RBP	13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	CDX4	O14627	284 aa	Predicted RBP	13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	DAPK3	O43293	454 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	CREB3	O43889	395 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	PRPSAP2	O60256	369 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	DFNA5	O60443	496 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	GJB6	O95452	261 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	CEACAM1	P13688	526 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	CHRNA3	P32297	505 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	IRAK1	P51617	712 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	CCR5	P51681	352 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	GALC	P54803	685 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	C21orf59	P57076	290 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	YBEY	P58557	167 aa	Predicted RBP	13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	RPL7A	P62424	266 aa	Known RBP	13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	RACK1	P63244	317 aa	Known RBP	13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	RAD51	Q06609	339 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	NFKBIB	Q15653	356 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	PRPF39	Q86UA1	669 aa	Known RBP	13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	RETREG3	Q86VR2	466 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	MINDY1	Q8N5J2	469 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	CCDC185	Q8N715	623 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	PIP4K2C	Q8TBX8	421 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	TSC1	Q92574	1164 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	BIRC7	Q96CA5	298 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	SYT11	Q9BT88	431 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	MTG2	Q9H4K7	406 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	TMPRSS4	Q9NRS4	437 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	DNAI1	Q9UI46	699 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	LCMT1	Q9UIC8	334 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	PPM1H	Q9ULR3	514 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	FZD10	Q9ULW2	581 aa		13.88	□□□□□ -0.19
SFXN4-208	ENST00000490417	PI4KA	P42356	2102 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	DDX3X	O00571	662 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	TM4SF5	O14894	197 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	SNAP91	O60641	907 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	MAGEC1	O60732	1142 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	KCNK5	O95279	499 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	SKIL	P12757	684 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	PBX1	P40424	430 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	GRIA4	P48058	902 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	NUMB	P49757	651 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	SERPINH1	P50454	418 aa	Known RBP	13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	NOVA1	P51513	510 aa	Known RBP	13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	DNA2	P51530	1060 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	TPI1	P60174	286 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	PARP15	Q460N3	678 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	ERMARD	Q5T6L9	678 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	MANEAL	Q5VSG8	457 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	SPECC1L	Q69YQ0	1117 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	NEK5	Q6P3R8	708 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	NCEH1	Q6PIU2	408 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417		Q6ZVU0	165 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	RTL3	Q8N8U3	475 aa	Known RBP	13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	OR7D4	Q8NG98	312 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	OR52K2	Q8NGK3	314 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	ISG20	Q96AZ6	181 aa	Known RBP	13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	LRIG1	Q96JA1	1093 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	PSMB7	Q99436	277 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	ACE2	Q9BYF1	805 aa	Predicted RBP	13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	ISCU	Q9H1K1	167 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	PRDM9	Q9NQV7	894 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	DNAAF2	Q9NVR5	837 aa	Known RBP	13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	TAS2R14	Q9NYV8	317 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	IL36A	Q9UHA7	158 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms