RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
SRSF4-204ENST00000489898 TMEM248Q9NWD8 314 aa12.09□□□□□ -0.47
SRSF4-204ENST00000489898 MSRB2Q9Y3D2 182 aa12.09□□□□□ -0.47
SRSF4-204ENST00000489898 RP1P56715 2156 aa12.09□□□□□ -0.47
SRSF4-204ENST00000489898 A0A1B0GTH6 734 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 PES1O00541 588 aaKnown RBP12.08□□□□□ -0.48
SRSF4-204ENST00000489898 FLRT2O43155 660 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 MBD3O95983 291 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 F9P00740 461 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 EPHA8P29322 1005 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-204ENST00000489898 STAT1P42224 750 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 ABL2P42684 1182 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 CCT8P50990 548 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 ATXN3P54252 364 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-204ENST00000489898 GNA12Q03113 381 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 CAMK2BQ13554 666 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 PRAMEF14Q5SWL7 426 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 TPRG1LQ5T0D9 272 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 ZNF783Q6ZMS7 281 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 GCNT7Q6ZNI0 430 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 DPY19L3Q6ZPD9 716 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 PARS2Q7L3T8 475 aaKnown RBP12.08□□□□□ -0.48
SRSF4-204ENST00000489898 MARCH9Q86YJ5 346 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 FAM172AQ8WUF8 416 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 OR8D1Q8WZ84 308 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
SRSF4-204ENST00000489898 RNF34Q969K3 372 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 NAP1L5Q96NT1 182 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-204ENST00000489898 C2orf49Q9BVC5 232 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-204ENST00000489898 TNKS2Q9H2K2 1166 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 PDFQ9HBH1 243 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 SLC12A6Q9UHW9 1150 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 GGT7Q9UJ14 662 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 SLC25A13Q9UJS0 675 aa12.08□□□□□ -0.48
SRSF4-204ENST00000489898 CXorf51AA0A1B0GTR3 108 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 FAM47DPA6NHR8 397 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 ATMINO43313 823 aaPredicted RBP12.07□□□□□ -0.48
SRSF4-204ENST00000489898 CLCN6P51797 869 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 OXCT1P55809 520 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 ZNF284Q2VY69 593 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 HGSNATQ68CP4 663 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 SEL1L3Q68CR1 1132 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 IL27RAQ6UWB1 636 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.07□□□□□ -0.48
SRSF4-204ENST00000489898 GATAD2AQ86YP4 633 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 DRC7Q8IY82 874 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 MCOLN2Q8IZK6 566 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 OR14C36Q8NHC7 312 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 NSMCE3Q96MG7 304 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 ELF4Q99607 663 aaPredicted RBP12.07□□□□□ -0.48
SRSF4-204ENST00000489898 AGPAT1Q99943 283 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 OMDQ99983 421 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 MUC3BQ9H195 1237 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 KDM4CQ9H3R0 1056 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 SLC32A1Q9H598 525 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 ZMIZ1Q9ULJ6 1067 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 PNMA8BQ9ULN7 279 aaPredicted RBP12.07□□□□□ -0.48
SRSF4-204ENST00000489898 NENFQ9UMX5 172 aa12.07□□□□□ -0.48
SRSF4-204ENST00000489898 FCF1Q9Y324 198 aaKnown RBP12.07□□□□□ -0.48
SRSF4-204ENST00000489898 LY6G6EA0A0G2JKS1 128 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 LRRC72A6NJI9 287 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 LRRC53A6NM62 1247 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 SIGLEC16A6NMB1 481 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 DDX3XO00571 662 aaKnown RBP eCLIP12.06□□□□□ -0.48
SRSF4-204ENST00000489898 RAD51BO15315 384 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 LEFTY1O75610 366 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 RHOQP17081 205 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 GPD1P21695 349 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 CD38P28907 300 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 OR1E1P30953 314 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 SDC4P31431 198 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 GKP32189 559 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 CHRNA3P32297 505 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 PRKCIP41743 596 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 MAPKAPK2P49137 400 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 CCNHP51946 323 aaPredicted RBP12.06□□□□□ -0.48
SRSF4-204ENST00000489898 ZNF143P52747 638 aaPredicted RBP12.06□□□□□ -0.48
SRSF4-204ENST00000489898 SNX16P57768 344 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 UBXN1Q04323 297 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 HNRNPDQ14103 355 aaKnown RBP12.06□□□□□ -0.48
SRSF4-204ENST00000489898 CA9Q16790 459 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 FKBP15Q5T1M5 1219 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 C6orf118Q5T5N4 469 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 PLEKHA7Q6IQ23 1121 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 CCNI2Q6ZMN8 369 aaPredicted RBP12.06□□□□□ -0.48
SRSF4-204ENST00000489898 ZNF571Q7Z3V5 609 aaPredicted RBP12.06□□□□□ -0.48
SRSF4-204ENST00000489898 TMIEQ8NEW7 156 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 NEK11Q8NG66 645 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 GRIN3AQ8TCU5 1115 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 TSC1Q92574 1164 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 MCEEQ96PE7 176 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 KLF6Q99612 283 aaPredicted RBP12.06□□□□□ -0.48
SRSF4-204ENST00000489898 HDAC8Q9BY41 377 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 CEP44Q9C0F1 390 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 PREBQ9HCU5 417 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 FZD3Q9NPG1 666 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 ADAM22Q9P0K1 906 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 LHX3Q9UBR4 397 aa12.06□□□□□ -0.48
SRSF4-204ENST00000489898 OR12D3Q9UGF7 316 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms