RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 HAUS2Q9NVX0 235 aa14.42□□□□□ -0.1
VPS26A-205ENST00000489656 ZNF446Q9NWS9 450 aa14.42□□□□□ -0.1
VPS26A-205ENST00000489656 DUS2Q9NX74 493 aaKnown RBP14.42□□□□□ -0.1
VPS26A-205ENST00000489656 UBA2Q9UBT2 640 aaPredicted RBP14.42□□□□□ -0.1
VPS26A-205ENST00000489656 C5orf42Q9H799 3197 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 GOLGA6CA6NDK9 693 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 GOLGA6BA6NDN3 693 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 E7EVH7 732 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 MAP2K7O14733 419 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 HOXC11O43248 304 aaPredicted RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 ANXA9O76027 345 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 AP2A1O95782 977 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 ADH1CP00326 375 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 CYP17A1P05093 508 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 GOLGA6DP0CG33 693 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 MLNP12872 115 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 LAMP2P13473 410 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 TYRP14679 529 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 IGFBP4P22692 258 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 MAGEA3P43357 314 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 TNNT3P45378 269 aaPredicted RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 ARL4CP56559 192 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 GEMIN4P57678 1058 aaKnown RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 SARNPP82979 210 aaKnown RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 ARF5P84085 180 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 LMAN2Q12907 356 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 PRPSAP1Q14558 356 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 CASP8Q14790 479 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 PDGFRLQ15198 375 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 DHCR24Q15392 516 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 SLC14A2Q15849 920 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 HIF1AQ16665 826 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 INO80DQ53TQ3 878 aaPredicted RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 FAM182AQ5T1J6 154 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 KCTD11Q693B1 232 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 TRMT10CQ7L0Y3 403 aaKnown RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 KIAA0907Q7Z7F0 614 aaPredicted RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 MFSD6LQ8IWD5 586 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 MICALL1Q8N3F8 863 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 BBS5Q8N3I7 341 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 TAB3Q8N5C8 712 aaPredicted RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 USP33Q8TEY7 942 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 ELSPBP1Q96BH3 223 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 RBM15Q96T37 977 aaKnown RBP eCLIP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 FAM83CQ9BQN1 747 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 SPON2Q9BUD6 331 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 C2orf49Q9BVC5 232 aaPredicted RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 POMKQ9H5K3 350 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 XAB2Q9HCS7 855 aaKnown RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 THG1LQ9NWX6 298 aaKnown RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 GOLGA6AQ9NYA3 693 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 PLK2Q9NYY3 685 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 CD207Q9UJ71 328 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 VPS28Q9UK41 221 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 FBXO10Q9UK96 956 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 CLEC4EQ9ULY5 219 aa14.41□□□□□ -0.1
VPS26A-205ENST00000489656 AAR2Q9Y312 384 aaKnown RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 MUC22E2RYF6 1773 aaPredicted RBP14.41□□□□□ -0.1
VPS26A-205ENST00000489656 SZT2Q5T011 3432 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 NEDD8-MDP1E9PL57 170 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 NEBLO76041 1014 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 NFATC1O95644 943 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 GLDCP23378 1020 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 PMS2P54278 862 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 GAD2Q05329 585 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 DMC1Q14565 340 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 PLEKHG6Q3KR16 790 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 TANGO2Q6ICL3 276 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 VITQ6UXI7 678 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 CENPUQ71F23 418 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 ZNF534Q76KX8 674 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 METTL3Q86U44 580 aaKnown RBP14.4□□□□□ -0.1
VPS26A-205ENST00000489656 PDIK1LQ8N165 341 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 TSEN2Q8NCE0 465 aaKnown RBP14.4□□□□□ -0.1
VPS26A-205ENST00000489656 ATP2A3Q93084 1043 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 TADA1Q96BN2 335 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 ASIC4Q96FT7 647 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 IMP4Q96G21 291 aaKnown RBP14.4□□□□□ -0.1
VPS26A-205ENST00000489656 LRCH3Q96II8 777 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 GDAP1L1Q96MZ0 367 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 SERPINB12Q96P63 405 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 PSKH2Q96QS6 385 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 MGME1Q9BQP7 344 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 MLPHQ9BV36 600 aaPredicted RBP14.4□□□□□ -0.1
VPS26A-205ENST00000489656 POLR1EQ9GZS1 481 aaKnown RBP14.4□□□□□ -0.1
VPS26A-205ENST00000489656 PABPC3Q9H361 631 aaKnown RBP14.4□□□□□ -0.1
VPS26A-205ENST00000489656 LRRC40Q9H9A6 602 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 NT5MQ9NPB1 228 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 VPS45Q9NRW7 570 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 EPS15L1Q9UBC2 864 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 SEPT3Q9UH03 358 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 VPS51Q9UID3 782 aa14.4□□□□□ -0.1
VPS26A-205ENST00000489656 CBX4O00257 560 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 ALOX15BO15296 676 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 ECI2O75521 394 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 CD160O95971 181 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 ADH5P11766 374 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 HLA-FP30511 346 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
VPS26A-205ENST00000489656 CD70P32970 193 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms