RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CDKL5O76039 1030 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 STK17BO94768 372 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 LETM1O95202 739 aaPredicted RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 IFNA2P01563 188 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 ADRB2P07550 413 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 CLTAP09496 248 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 ZDHHC11BP0C7U3 371 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 RARAP10276 462 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 PTPN1P18031 435 aaKnown RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 HNRNPA2B1P22626 353 aaKnown RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 AKT2P31751 481 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 GGCXP38435 758 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 SPAM1P38567 509 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 PBX1P40424 430 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 VAMP7P51809 220 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 THOP1P52888 689 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 ZNF445P59923 1031 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 UBE2HP62256 183 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 GOLGA8FQ08AF8 430 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 GOLGA8DPQ0D2H9 430 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 IFRD2Q12894 506 aaPredicted RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 EIF2B5Q13144 721 aaKnown RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 C1orf61Q13536 156 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 MAP7Q14244 749 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 ASIC2Q16515 512 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 PFKFB3Q16875 520 aaPredicted RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 KRTAP24-1Q3LI83 254 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 FOXD4L6Q3SYB3 417 aaPredicted RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 NCAPH2Q6IBW4 605 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 MTFR2Q6P444 385 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 FOXD4L3Q6VB84 417 aaPredicted RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 SYNE3Q6ZMZ3 975 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 CHST9Q7L1S5 443 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 KRTAP1-3Q8IUG1 177 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 ESX1Q8N693 406 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 BMPERQ8N8U9 685 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 AGBL5Q8NDL9 886 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 FDCSPQ8NFU4 85 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 WFIKKN2Q8TEU8 576 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 BTN2A2Q8WVV5 523 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 FBXO32Q969P5 355 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 MYLPFQ96A32 169 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 MBD6Q96DN6 1003 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 BMFQ96LC9 184 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 C8orf48Q96LL4 319 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 CCDC74BQ96LY2 380 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 LRRC2Q9BYS8 371 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 SCAND2PQ9GZW5 306 aaPredicted RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 ING2Q9H160 280 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 LIME1Q9H400 295 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 RDH14Q9HBH5 336 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 CRTAC1Q9NQ79 661 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 SIRPGQ9P1W8 387 aa7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 MAGEC2Q9UBF1 373 aaPredicted RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 APOBEC3BQ9UH17 382 aaKnown RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 DDX25Q9UHL0 483 aaKnown RBP7.72□□□□□ -1.17
EXOSC3-206ENST00000489414 A0A087WWV3 80 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 KLF18A0A0U1RQI7 1052 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 PIPSLA2A3N6 862 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 GOLGA8BA8MQT2 603 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 CLDN14O95500 239 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 CPNE6O95741 557 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 PNLIPP16233 465 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 YWHAQP27348 245 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 METAP1P53582 386 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 TPRG1LQ5T0D9 272 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 AGBL4Q5VU57 503 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 JADE1Q6IE81 842 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 PLEKHA7Q6IQ23 1121 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 KYAT3Q6YP21 454 aaKnown RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 NCCRP1Q6ZVX7 275 aaPredicted RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 KIAA0907Q7Z7F0 614 aaPredicted RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 PIM3Q86V86 326 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 OSTM1Q86WC4 334 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 MICU3Q86XE3 530 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 NRSN1Q8IZ57 195 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 TMTC2Q8N394 836 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 PCDH19Q8TAB3 1148 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 BICD2Q8TD16 824 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 CCDC12Q8WUD4 166 aaPredicted RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 FAM129BQ96TA1 746 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 SMAD5Q99717 465 aaKnown RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 EIF2AK1Q9BQI3 630 aaKnown RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 MTA3Q9BTC8 594 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 ILKAPQ9H0C8 392 aaPredicted RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 KMT5AQ9NQR1 393 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 OCIAD1Q9NX40 245 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 TMEM63CQ9P1W3 806 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 ORC3Q9UBD5 711 aaPredicted RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 CHORDC1Q9UHD1 332 aaPredicted RBP7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 TRPS1Q9UHF7 1281 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 L1RE1Q9UN81 338 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 PCDHGC4Q9Y5F7 938 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 SLC12A7Q9Y666 1083 aa7.71□□□□□ -1.18
EXOSC3-206ENST00000489414 SPINT1O43278 529 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 TLR5O60602 858 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 TOM1L1O75674 476 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 TBX18O95935 607 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 ATP5BP06576 529 aaKnown RBP7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 CELA2BP08218 269 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms