RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SHANK1Q9Y566 2161 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 MKRN2OSH3BPM6 223 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 MCF2LO15068 1137 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 RAD1O60671 282 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 LUC7L3O95232 432 aaKnown RBP15.43■□□□□ 0.06
UFD1-209ENST00000489406 VNN1O95497 513 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 CYP2J2P51589 502 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 TKTL1P51854 596 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 TCEA2Q15560 299 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 ATP1A1-AS1Q5TC04 95 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 C16orf46Q6P387 395 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 PIGZQ86VD9 579 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 SLITRK4Q8IW52 837 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 ULBP1Q9BZM6 244 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 GPN2Q9H9Y4 310 aaPredicted RBP15.43■□□□□ 0.06
UFD1-209ENST00000489406 AKAP7Q9P0M2 348 aaPredicted RBP15.43■□□□□ 0.06
UFD1-209ENST00000489406 NAALADL1Q9UQQ1 740 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 SVILO95425 2214 aa15.43■□□□□ 0.06
UFD1-209ENST00000489406 TCP11X1B4DZS4 312 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 KPNA3O00505 521 aaPredicted RBP15.42■□□□□ 0.06
UFD1-209ENST00000489406 ZBED1O96006 694 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 RECQLP46063 649 aaPredicted RBP15.42■□□□□ 0.06
UFD1-209ENST00000489406 RAB41Q5JT25 222 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 FAXCQ5TGI0 409 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 SPOPLQ6IQ16 392 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 Q6ZVU0 165 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 BHLHA9Q7RTU4 235 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 PCDH19Q8TAB3 1148 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 TAAR9Q96RI9 348 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 NT5C1AQ9BXI3 368 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 SLC13A1Q9BZW2 595 aa15.42■□□□□ 0.06
UFD1-209ENST00000489406 CCDC168Q8NDH2 2452 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 FPGTO14772 594 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 CLIC2O15247 247 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 ALOX15BO15296 676 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 CTSLP07711 333 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 FGF3P11487 239 aaPredicted RBP15.41■□□□□ 0.06
UFD1-209ENST00000489406 HOXD13P35453 343 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 ASPAP45381 313 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 CCDC15Q0P6D6 951 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 DCAF6Q58WW2 860 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 EFHC2Q5JST6 749 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 PM20D1Q6GTS8 502 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 UNC45BQ8IWX7 931 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 MCEMP1Q8IX19 187 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 SCG3Q8WXD2 468 aaKnown RBP15.41■□□□□ 0.06
UFD1-209ENST00000489406 PANK4Q9NVE7 773 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 PCDHGA3Q9Y5H0 932 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 B3GALT1Q9Y5Z6 326 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 KCNMB2Q9Y691 235 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 TRPM6Q9BX84 2022 aa15.41■□□□□ 0.06
UFD1-209ENST00000489406 PDGFAP04085 211 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 THOP1P52888 689 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 PTK2BQ14289 1009 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 DLG2Q15700 870 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 ARHGAP44Q17R89 818 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 SGSM1Q2NKQ1 1148 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 ZXDCQ2QGD7 858 aaPredicted RBP15.4■□□□□ 0.06
UFD1-209ENST00000489406 MS4A13Q5J8X5 152 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 MCTP1Q6DN14 999 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 TP53INP2Q8IXH6 220 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 UNC5BQ8IZJ1 945 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 XXYLT1Q8NBI6 393 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 TTC13Q8NBP0 860 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 PLEKHO2Q8TD55 490 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 KIAA1143Q96AT1 154 aaPredicted RBP15.4■□□□□ 0.06
UFD1-209ENST00000489406 TBATAQ96M53 351 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 HAPLN3Q96S86 360 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 KLF6Q99612 283 aaPredicted RBP15.4■□□□□ 0.06
UFD1-209ENST00000489406 DDX50Q9BQ39 737 aaKnown RBP15.4■□□□□ 0.06
UFD1-209ENST00000489406 NUCKS1Q9H1E3 243 aaKnown RBP15.4■□□□□ 0.06
UFD1-209ENST00000489406 DYRK4Q9NR20 520 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 GPR34Q9UPC5 381 aa15.4■□□□□ 0.06
UFD1-209ENST00000489406 LOC101059948A0A1B0GTJ6 334 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 RNF103O00237 685 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 IGLV3-27P01718 113 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 C4BPAP04003 597 aaKnown RBP15.39■□□□□ 0.05
UFD1-209ENST00000489406 PDGFRAP16234 1089 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 RPS21P63220 83 aaKnown RBP15.39■□□□□ 0.05
UFD1-209ENST00000489406 SULT2A1Q06520 285 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 INCA1Q0VD86 236 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 SV2BQ7L1I2 683 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 RCBTB1Q8NDN9 531 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 OR6C4Q8NGE1 309 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 ERCC4Q92889 916 aaPredicted RBP15.39■□□□□ 0.05
UFD1-209ENST00000489406 AZIN2Q96A70 460 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 C5orf34Q96MH7 638 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 LLPHQ9BRT6 129 aaKnown RBP15.39■□□□□ 0.05
UFD1-209ENST00000489406 UBXN6Q9BZV1 441 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 RDH14Q9HBH5 336 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 AGPAT3Q9NRZ7 376 aa15.39■□□□□ 0.05
UFD1-209ENST00000489406 YJEFN3A6XGL0 299 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 E7ENQ6 273 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 M0QYT0 321 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 ATP9BO43861 1147 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 PRR29P0C7W0 189 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 CD58P19256 250 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 TCN2P20062 427 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 LONP1P36776 959 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms