RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 K7ERQ8 282 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 EEF2KO00418 725 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 KRIT1O00522 736 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 MT-CO1P00395 513 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 SERPING1P05155 500 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 GLDCP23378 1020 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 CD38P28907 300 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 MAT2AP31153 395 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 HTR7P34969 479 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 ARRB1P49407 418 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 SNRPD1P62314 119 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 ZBED6P86452 979 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 SCAPQ12770 1279 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 MAMLD1Q13495 774 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 STAT4Q14765 748 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 KIF19Q2TAC6 998 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 PARP15Q460N3 678 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 HS1BP3Q53T59 392 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 CARD16Q5EG05 197 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 ARSIQ5FYB1 569 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 PPP6R3Q5H9R7 873 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 FIGNQ5HY92 759 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 ERN2Q76MJ5 926 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 ZNF571Q7Z3V5 609 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 BNIPLQ7Z465 357 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 TMIEQ8NEW7 156 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 OR52K2Q8NGK3 314 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 SYN2Q92777 582 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 SLC6A18Q96N87 628 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 PSMB7Q99436 277 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 EIF3CQ99613 913 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 FUCA2Q9BTY2 467 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 TM6SF2Q9BZW4 377 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 DHX35Q9H5Z1 703 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 PREBQ9HCU5 417 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 OSGEPQ9NPF4 335 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 TM7SF3Q9NS93 570 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 TAS2R14Q9NYV8 317 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 HECAQ9UBI9 543 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 PCSK1NQ9UHG2 260 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 FZD10Q9ULW2 581 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 AP4E1Q9UPM8 1137 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 DMTF1Q9Y222 760 aa9.31□□□□□ -0.92
HDAC6-232ENST00000489053 FCF1Q9Y324 198 aaKnown RBP9.31□□□□□ -0.92
HDAC6-232ENST00000489053 EML5Q05BV3 1969 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 SPAARA0A1B0GVQ0 90 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ARHGAP42A6NI28 874 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 FAM72CH0Y354 149 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 I6L893 689 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 PLK4O00444 970 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 TM4SF5O14894 197 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 GIPC1O14908 333 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 YKT6O15498 198 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 FLRT2O43155 660 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 SMAD6O43541 496 aaKnown RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 PLRG1O43660 514 aaKnown RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 SH3BP5O60239 455 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 RNGTTO60942 597 aaKnown RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 LEFTY1O75610 366 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 TRIM16O95361 564 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 IGSF6O95976 241 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 IGHV4-34P06331 123 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ZNF883P0CG24 379 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 AKT2P31751 481 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ACVRL1P37023 503 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ARL4AP40617 200 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 PRKCIP41743 596 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 GRK6P43250 576 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 CCNHP51946 323 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 NEK3P51956 506 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 RHOAP61586 193 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 SEMA3BQ13214 749 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 SGCGQ13326 291 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 MAPK8IP2Q13387 824 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 TRIM14Q14142 442 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 TRIP6Q15654 476 aaKnown RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ZNF423Q2M1K9 1284 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 RAB6CQ53S08 254 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ZFYVE27Q5T4F4 411 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ERMARDQ5T6L9 678 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 FAM72AQ5TYM5 149 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 NAPEPLDQ6IQ20 393 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 PLEKHA7Q6IQ23 1121 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 FAM72DQ6L9T8 149 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 LEKR1Q6ZMV7 388 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 DPY19L3Q6ZPD9 716 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 FAM72BQ86X60 149 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 PYROXD2Q8N2H3 581 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 OXR1Q8N573 874 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 RTL3Q8N8U3 475 aaKnown RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 OR2A12Q8NGT7 310 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 RHBDD1Q8TEB9 315 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 CASKIN2Q8WXE0 1202 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ARHGEF2Q92974 986 aaKnown RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 ARHGEF26Q96DR7 871 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 GDAP1L1Q96MZ0 367 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 CDC6Q99741 560 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 OSBPL1AQ9BXW6 950 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 RAB6CQ9H0N0 254 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms