RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PAPSS1O43252 624 aaPredicted RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CTIFO43310 598 aaKnown RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 PROM1O43490 865 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 PAGE4O60829 102 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 RTN2O75298 545 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 FTCDO95954 541 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SNRPA1P09661 255 aaKnown RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 KCNA3P22001 575 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CD6P30203 668 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 TTKP33981 857 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CPOXP36551 454 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 MTHFRP42898 656 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 KIR2DL3P43628 341 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 PIP4K2AP48426 406 aaPredicted RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 LIG4P49917 911 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 MEOX1P50221 254 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 NPY4RP50391 375 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 DGKEP52429 567 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ADAM8P78325 824 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 FOXL1Q12952 345 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CBX3Q13185 183 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CAMK2DQ13557 499 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ALCAMQ13740 583 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 KCNJ12Q14500 433 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ACOX1Q15067 660 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 TRADDQ15628 312 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 MGAT5BQ3V5L5 792 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CACHD1Q5VU97 1274 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CST9LP1Q5W188 147 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 JADE1Q6IE81 842 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 HMBOX1Q6NT76 420 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 IRGCQ6NXR0 463 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 WDR93Q6P2C0 686 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SHQ1Q6PI26 577 aaKnown RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 Q6ZPA2 131 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 RABEPKQ7Z6M1 372 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 KBTBD6Q86V97 674 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 TUSC5Q8IXB3 177 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ANKRD35Q8N283 1001 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 HDDC3Q8N4P3 179 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 MRPL43Q8N983 215 aaKnown RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CEP76Q8TAP6 659 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SETD6Q8TBK2 473 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 MDM1Q8TC05 714 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CORO2AQ92828 525 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 GFM2Q969S9 779 aaKnown RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SYAP1Q96A49 352 aaPredicted RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 FAM149B1Q96BN6 582 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 TMCO6Q96DC7 493 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 LRIG1Q96JA1 1093 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 KLHL32Q96NJ5 620 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 RUNDC3BQ96NL0 473 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 WDFY2Q96P53 400 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 MRI1Q9BV20 369 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SLC25A23Q9BV35 468 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 TEX13BQ9BXU2 312 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ENKD1Q9H0I2 346 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 HSD3B7Q9H2F3 369 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SLC32A1Q9H598 525 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CCDC134Q9H6E4 229 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 NRDE2Q9H7Z3 1164 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 TLR8Q9NR97 1041 aaKnown RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 DDX43Q9NXZ2 648 aaKnown RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ETAA1Q9NY74 926 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 AKAP7Q9P0M2 348 aaPredicted RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SH3BP4Q9P0V3 963 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ACTR3BQ9P1U1 418 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 SEC63Q9UGP8 760 aaKnown RBP3.56□□□□□ -1.84
PRPF4-203ENST00000488937 ZNHIT2Q9UHR6 403 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 APPL1Q9UKG1 709 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 CDYLQ9Y232 598 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 PCDHGA5Q9Y5G8 931 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 PCDHGA1Q9Y5H4 931 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 POMT1Q9Y6A1 747 aa3.56□□□□□ -1.84
PRPF4-203ENST00000488937 PNPLA7Q6ZV29 1317 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 TRBC2A0A5B9 178 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 LRRD1A4D1F6 860 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 RGSL1A5PLK6 1076 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 C2orf78A6NCI8 922 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 CXorf49A8MYA2 514 aaPredicted RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 BTBD18B2RXH4 712 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 AGPSO00116 658 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 CTDSP2O14595 271 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 KIAA0391O15091 583 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ADAMDEC1O15204 470 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 PJA2O43164 708 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SMPD2O60906 423 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 DDAH2O95865 285 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 HEXBP07686 556 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ABCB1P08183 1280 aaPredicted RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 PRR35P0CG20 571 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 RAP2AP10114 183 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 KRT13P13646 458 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 FDPSP14324 419 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ATP5JP18859 108 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 CASTP20810 708 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 AGAP20933 346 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 KCNA5P22460 613 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 LRPAP1P30533 357 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 HOXA13P31271 388 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms