RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TTC24A2A3L6 582 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 APOC4-APOC2K7ER74 178 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 KIF2AO00139 706 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 MFSD11O43934 449 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 SYNCRIPO60506 623 aaKnown RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 NEBLO76041 1014 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 KLF8O95600 359 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 APOC2P02655 101 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 DCNP07585 359 aaKnown RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 PRLRP16471 622 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 TCP1P17987 556 aaKnown RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 NTSR1P30989 418 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 DEKP35659 375 aaKnown RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 CTSOP43234 321 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 KIR2DL1P43626 348 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 RPS9P46781 194 aaKnown RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 IL10RBQ08334 325 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 GALNT2Q10471 571 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 ZNF234Q14588 700 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 LONRF2Q1L5Z9 754 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 DCAF12L1Q5VU92 463 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 EGFLAMQ63HQ2 1017 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 LINGO4Q6UY18 593 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 BMP8AQ7Z5Y6 402 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 SLC13A5Q86YT5 568 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 ARHGAP12Q8IWW6 846 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 CCDC105Q8IYK2 499 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 BBS5Q8N3I7 341 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 CCDC33Q8N5R6 958 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 ALLCQ8N6M5 410 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 KDM1BQ8NB78 822 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 TXNDC5Q8NBS9 432 aaKnown RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 NETO2Q8NC67 525 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 RPLP0P6Q8NHW5 317 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 SNIP1Q8TAD8 396 aaKnown RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 USP33Q8TEY7 942 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 LRRN4Q8WUT4 740 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 CASKIN2Q8WXE0 1202 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 EZH1Q92800 747 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 CLDN23Q96B33 292 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 WDR24Q96S15 920 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 NAP1L3Q99457 506 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 IER2Q9BTL4 223 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 HAUS2Q9NVX0 235 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 DTLQ9NZJ0 730 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 THAP10Q9P2Z0 257 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 UBA2Q9UBT2 640 aaPredicted RBP10.5□□□□□ -0.73
SKA1-204ENST00000488454 SNX12Q9UMY4 172 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 STON1Q9Y6Q2 735 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 TICRRQ7Z2Z1 1910 aa10.5□□□□□ -0.73
SKA1-204ENST00000488454 KIF26AQ9ULI4 1882 aaPredicted RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 H7C0C1 242 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 J3KR12 359 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 PRAMEF11O60813 436 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 ZMPSTE24O75844 475 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 MAP3K6O95382 1288 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 PDGFBP01127 241 aaPredicted RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 FGGP02679 453 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 EPHX1P07099 455 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 AOC1P19801 751 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 GLDCP23378 1020 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 CCNCP24863 283 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 GARSP41250 739 aaKnown RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 WASP42768 502 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 RECQLP46063 649 aaPredicted RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 ATP5OP48047 213 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 AP1B1Q10567 949 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 SLC10A2Q12908 348 aaPredicted RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 FZD5Q13467 585 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 RFTN1Q14699 578 aaPredicted RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 STARD3Q14849 445 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 DLG2Q15700 870 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 INO80DQ53TQ3 878 aaPredicted RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 TMCO4Q5TGY1 634 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 NPNTQ6UXI9 565 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 SYT10Q6XYQ8 523 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 LEKR1Q6ZMV7 388 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 TP53INP2Q8IXH6 220 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 TFB1MQ8WVM0 346 aaKnown RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 HAUS1Q96CS2 278 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 C16orf45Q96MC5 204 aaPredicted RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 ZNF599Q96NL3 588 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 TSGA13Q96PP4 275 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 OSBPL9Q96SU4 736 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 CACNA2D2Q9NY47 1150 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 SAE1Q9UBE0 346 aaPredicted RBP10.49□□□□□ -0.73
SKA1-204ENST00000488454 SLCO3A1Q9UIG8 710 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 HS3ST2Q9Y278 367 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 SAR1BQ9Y6B6 198 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 MYOFQ9NZM1 2061 aa10.49□□□□□ -0.73
SKA1-204ENST00000488454 TARSL2A2RTX5 802 aaKnown RBP10.48□□□□□ -0.73
SKA1-204ENST00000488454 TTC34A8MYJ7 566 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 HACD1B0YJ81 288 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 CHURC1-FNTBB4DL54 471 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 WASH3PC4AMC7 463 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 CES2O00748 559 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 MCF2LO15068 1137 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 MATN3O15232 486 aa10.48□□□□□ -0.73
SKA1-204ENST00000488454 MTSS1O43312 755 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms