RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 AADATQ8N5Z0 425 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 PCDH20Q8N6Y1 951 aaKnown RBP16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 NETO2Q8NC67 525 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 CHST14Q8NCH0 376 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 HSPA12BQ96MM6 686 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 BAG1Q99933 345 aaPredicted RBP16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 GPR174Q9BXC1 333 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 SLC39A8Q9C0K1 460 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 PDFQ9HBH1 243 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 ETNK2Q9NVF9 386 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 SARDHQ9UL12 918 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 HPCAL4Q9UM19 191 aa16.32■□□□□ 0.2
ERGIC3-216ENST00000488384 A0A1W2PP55 124 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 RCCD1A6NED2 376 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 LRP3O75074 770 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 NDUFS2O75306 463 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 IL1BP01584 269 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 C5AR1P21730 350 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 AMPD1P23109 780 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 IL4RP24394 825 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 ACSL1P33121 698 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 DRD3P35462 400 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 MMRN1Q13201 1228 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 DPYSL3Q14195 570 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 KRT81Q14533 505 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 PLA2G2CQ5R387 149 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 DPY19L3Q6ZPD9 716 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 DSG4Q86SJ6 1040 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 ZNF354CQ86Y25 554 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 TP53INP2Q8IXH6 220 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 ACRBPQ8NEB7 543 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 ISG20Q96AZ6 181 aaKnown RBP16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 CCDC114Q96M63 670 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 TM6SF2Q9BZW4 377 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 SEMA4GQ9NTN9 838 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 FBXL12Q9NXK8 326 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 RCOR3Q9P2K3 495 aaPredicted RBP16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 PPM1HQ9ULR3 514 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 RALGAPA1Q6GYQ0 2036 aa16.31■□□□□ 0.2
ERGIC3-216ENST00000488384 ATXN2Q99700 1313 aaKnown RBP16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 A0A0A6YYK5 440 aaPredicted RBP16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 ARHGAP42A6NI28 874 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 RNF103O00237 685 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 BUB1O43683 1085 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 RNASEH2AO75792 299 aaKnown RBP16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 TMCC1O94876 653 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 KRT7P08729 469 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 ITPKAP23677 461 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 CHRNA3P32297 505 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 PAPOLAP51003 745 aaKnown RBP16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 ZNF33AQ06730 810 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 PEAR1Q5VY43 1037 aaPredicted RBP16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 TMCO3Q6UWJ1 677 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 PIP4K2CQ8TBX8 421 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 GRIN3AQ8TCU5 1115 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 FAM131CQ96AQ9 280 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 ZNF419Q96HQ0 510 aaPredicted RBP16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 SMOC1Q9H4F8 434 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 LUC7LQ9NQ29 371 aaKnown RBP16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 FZD4Q9ULV1 537 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 WASF2Q9Y6W5 498 aa16.3■□□□□ 0.2
ERGIC3-216ENST00000488384 GOLGA6L6A8MZA4 724 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 C1QTNF3-AMACRE9PGA6 284 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 J3KR12 359 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 DFFAO00273 331 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 PLK4O00444 970 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 BUB1BO60566 1050 aaPredicted RBP16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 PRAMEF11O60813 436 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 IPO7O95373 1038 aaKnown RBP16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 SEMA4FO95754 770 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 GSRP00390 522 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 SLC1A1P43005 524 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 RECQLP46063 649 aaPredicted RBP16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 CCNHP51946 323 aaPredicted RBP16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 CSRP2Q16527 193 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 POM121L1PQ3SYA9 428 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 INO80DQ53TQ3 878 aaPredicted RBP16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 CARD16Q5EG05 197 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 FAM46CQ5VWP2 391 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 ARHGAP36Q6ZRI8 547 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 HDDC3Q8N4P3 179 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 LZTR1Q8N653 840 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 CADM4Q8NFZ8 388 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 GANCQ8TET4 914 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 CASKIN2Q8WXE0 1202 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 PIGKQ92643 395 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 VOPP1Q96AW1 172 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 FAF2Q96CS3 445 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 OMDQ99983 421 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 ZNF670Q9BS34 389 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 BTBD1Q9H0C5 482 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 PCED1AQ9H1Q7 454 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 NEUROG2Q9H2A3 272 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 GOLPH3Q9H4A6 298 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 C6orf106Q9H6K1 298 aaPredicted RBP16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 SGK2Q9HBY8 427 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 VPS45Q9NRW7 570 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 TMEM74BQ9NUR3 256 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 DLL3Q9NYJ7 618 aa16.29■□□□□ 0.2
ERGIC3-216ENST00000488384 SALL4Q9UJQ4 1053 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms