RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 CCDC157Q569K6 752 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 ARSIQ5FYB1 569 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 C22orf39Q6P5X5 142 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 DRC7Q8IY82 874 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 CHST14Q8NCH0 376 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 CEP44Q9C0F1 390 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 OSBPL2Q9H1P3 480 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 RETREG1Q9H6L5 497 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 ADAM22Q9P0K1 906 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 PLXNA2O75051 1894 aa23.09■■□□□ 1.29
PTPN4-211ENST00000488279 LRRC10BA6NIK2 292 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 LGALS16A8MUM7 142 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 ZMPSTE24O75844 475 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 LDOC1O95751 146 aaPredicted RBP23.08■■□□□ 1.29
PTPN4-211ENST00000488279 SERPINH1P50454 418 aaKnown RBP23.08■■□□□ 1.29
PTPN4-211ENST00000488279 NRG1Q02297 640 aaPredicted RBP23.08■■□□□ 1.29
PTPN4-211ENST00000488279 STX1AQ16623 288 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 RAB6CQ53S08 254 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 RWDD4Q6NW29 188 aaKnown RBP23.08■■□□□ 1.29
PTPN4-211ENST00000488279 DPY19L3Q6ZPD9 716 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 ERN2Q76MJ5 926 aaKnown RBP23.08■■□□□ 1.29
PTPN4-211ENST00000488279 STRADAQ7RTN6 431 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 ARRDC3Q96B67 414 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 PPP1R16AQ96I34 528 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 PCDHB18PQ96TA0 734 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 HDAC8Q9BY41 377 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 RAB6CQ9H0N0 254 aa23.08■■□□□ 1.29
PTPN4-211ENST00000488279 CCDC86Q9H6F5 360 aaKnown RBP23.08■■□□□ 1.29
PTPN4-211ENST00000488279 DSPP15924 2871 aaKnown RBP23.08■■□□□ 1.29
PTPN4-211ENST00000488279 TMEM131Q92545 1883 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 A0A1W2PQU0 124 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 ZNF821O75541 412 aaPredicted RBP23.07■■□□□ 1.28
PTPN4-211ENST00000488279 LEFTY1O75610 366 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 EPHA8P29322 1005 aaPredicted RBP23.07■■□□□ 1.28
PTPN4-211ENST00000488279 ETFBP38117 255 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 PTPN9P43378 593 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 DNA2P51530 1060 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 PROSER1Q86XN7 944 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 SPATS2Q86XZ4 545 aaKnown RBP23.07■■□□□ 1.28
PTPN4-211ENST00000488279 EID2Q8N6I1 236 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 PCDH20Q8N6Y1 951 aaKnown RBP23.07■■□□□ 1.28
PTPN4-211ENST00000488279 JOSD2Q8TAC2 188 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 GRIN3AQ8TCU5 1115 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 CENPIQ92674 756 aaPredicted RBP23.07■■□□□ 1.28
PTPN4-211ENST00000488279 KLHDC7BQ96G42 594 aa23.07■■□□□ 1.28
PTPN4-211ENST00000488279 CNDP2Q96KP4 475 aaKnown RBP23.07■■□□□ 1.28
PTPN4-211ENST00000488279 TAF4O00268 1085 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 ENC1O14682 589 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 SLC31A1O15431 190 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 GJB6O95452 261 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 RHOQP17081 205 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 ARF5P84085 180 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 PTP4A2Q12974 167 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 BNIP3Q12983 259 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 SMAD1Q15797 465 aaKnown RBP23.06■■□□□ 1.28
PTPN4-211ENST00000488279 CLEC16AQ2KHT3 1053 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 CARD16Q5EG05 197 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 HORMAD1Q86X24 394 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 PHF13Q86YI8 300 aaPredicted RBP23.06■■□□□ 1.28
PTPN4-211ENST00000488279 FAM172AQ8WUF8 416 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 HEPHQ9BQS7 1158 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 SELENOOQ9BVL4 669 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 PCDHGA1Q9Y5H4 931 aa23.06■■□□□ 1.28
PTPN4-211ENST00000488279 CXorf51AA0A1B0GTR3 108 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 RNF103O00237 685 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 PCDH8O95206 1070 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 CALB1P05937 261 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 PLEKP08567 350 aaPredicted RBP23.05■■□□□ 1.28
PTPN4-211ENST00000488279 RFC1P35251 1148 aaPredicted RBP23.05■■□□□ 1.28
PTPN4-211ENST00000488279 MAPKAPK2P49137 400 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 GSCP56915 257 aaPredicted RBP23.05■■□□□ 1.28
PTPN4-211ENST00000488279 ZNF284Q2VY69 593 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 MANEALQ5VSG8 457 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 DHRS13Q6UX07 377 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 TMEM145Q8NBT3 493 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 KLK6Q92876 244 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 ERGIC2Q96RQ1 377 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 SEPT11Q9NVA2 429 aaKnown RBP23.05■■□□□ 1.28
PTPN4-211ENST00000488279 DNAI1Q9UI46 699 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 HPCAL4Q9UM19 191 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 CA5BQ9Y2D0 317 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 WASF2Q9Y6W5 498 aa23.05■■□□□ 1.28
PTPN4-211ENST00000488279 FAM72CH0Y354 149 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 C1SP09871 688 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 CDK4P11802 303 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 PRLRP16471 622 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 GPD1P21695 349 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 AKT2P31751 481 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 ACVRL1P37023 503 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 HDAC4P56524 1084 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 GEMIN4P57678 1058 aaKnown RBP23.04■■□□□ 1.28
PTPN4-211ENST00000488279 FAM72AQ5TYM5 149 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 FAM72DQ6L9T8 149 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 NLRP14Q86W24 1093 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 FAM72BQ86X60 149 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 C3orf20Q8ND61 904 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 ARHGEF2Q92974 986 aaKnown RBP23.04■■□□□ 1.28
PTPN4-211ENST00000488279 ISG20Q96AZ6 181 aaKnown RBP23.04■■□□□ 1.28
PTPN4-211ENST00000488279 NDFIP2Q9NV92 336 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 TMEM248Q9NWD8 314 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms