RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 SUSD6Q92537 303 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 MAML1Q92585 1016 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 RSPRY1Q96DX4 576 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 SIGLEC10Q96LC7 697 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 ASB16Q96NS5 453 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 RETREG1Q9H6L5 497 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 GDE1Q9NZC3 331 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 RSPH14Q9UHP6 348 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 RABGEF1Q9UJ41 708 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 LSM7Q9UK45 103 aaKnown RBP14.47□□□□□ -0.09
CUX1-209ENST00000487284 GRXCR2A6NFK2 248 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 F5H423 210 aaPredicted RBP14.47□□□□□ -0.09
CUX1-209ENST00000487284 F5H5T6 163 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 SUN1O94901 812 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 AP2A1O95782 977 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 JCHAINP01591 159 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 GSTA2P09210 222 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 CCNB1P14635 433 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 NFKB1P19838 968 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 GCAP28676 217 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 SLC6A4P31645 630 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 GRIA1P42261 906 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 MMP13P45452 471 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 MAPKAPK2P49137 400 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 PAPOLAP51003 745 aaKnown RBP14.47□□□□□ -0.09
CUX1-209ENST00000487284 PPP2R2AP63151 447 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 USP4Q13107 963 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 KCTD11Q693B1 232 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 LRRC8BQ6P9F7 803 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 CAPN12Q6ZSI9 719 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 C3orf62Q6ZUJ4 267 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 HTR3DQ70Z44 454 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 TFAP2DQ7Z6R9 452 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 BBS7Q8IWZ6 715 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 ST13P5Q8NFI4 369 aaPredicted RBP14.47□□□□□ -0.09
CUX1-209ENST00000487284 SMARCD2Q92925 531 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 MYEOVQ96EZ4 313 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 NECTIN4Q96NY8 510 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 RPRD1AQ96P16 312 aaPredicted RBP14.47□□□□□ -0.09
CUX1-209ENST00000487284 AGAP3Q96P47 875 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 CTNNAL1Q9UBT7 734 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 SLC24A2Q9UI40 661 aa14.47□□□□□ -0.09
CUX1-209ENST00000487284 ARHGAP42A6NI28 874 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 RASA4BC9J798 803 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 RASA4O43374 803 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 SHOX2O60902 331 aaPredicted RBP14.46□□□□□ -0.09
CUX1-209ENST00000487284 LATS1O95835 1130 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 ATP5DP30049 168 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 WEE1P30291 646 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 GBP2P32456 591 aaPredicted RBP14.46□□□□□ -0.09
CUX1-209ENST00000487284 HPDP32754 393 aaPredicted RBP14.46□□□□□ -0.09
CUX1-209ENST00000487284 VIPR2P41587 438 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 YBEYP58557 167 aaPredicted RBP14.46□□□□□ -0.09
CUX1-209ENST00000487284 ANO4Q32M45 955 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 ADGRF1Q5T601 910 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 RFWD3Q6PCD5 774 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 LGI2Q8N0V4 545 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 FBF1Q8TES7 1133 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 ZNF419Q96HQ0 510 aaPredicted RBP14.46□□□□□ -0.09
CUX1-209ENST00000487284 LRRC3BQ96PB8 259 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 EBNA1BP2Q99848 306 aaKnown RBP14.46□□□□□ -0.09
CUX1-209ENST00000487284 MLPHQ9BV36 600 aaPredicted RBP14.46□□□□□ -0.09
CUX1-209ENST00000487284 KIF9Q9HAQ2 790 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 PLAC1Q9HBJ0 212 aa14.46□□□□□ -0.09
CUX1-209ENST00000487284 IPO11Q9UI26 975 aaKnown RBP14.46□□□□□ -0.09
CUX1-209ENST00000487284 ANKRD36A6QL64 1941 aa14.46□□□□□ -0.1
CUX1-209ENST00000487284 TCRBV9S1A1TA0A576 114 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 E2F8A0AVK6 867 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 TRDMT1O14717 391 aaKnown RBP14.45□□□□□ -0.1
CUX1-209ENST00000487284 MBTPS2O43462 519 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 PEX11BO96011 259 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 CPP00450 1065 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 TCF3P15923 654 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 SP100P23497 879 aaPredicted RBP14.45□□□□□ -0.1
CUX1-209ENST00000487284 FCARP24071 287 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 IFNAR2P48551 515 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 ATP1A2P50993 1020 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 KLHL38Q2WGJ6 581 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 PARP15Q460N3 678 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 CELF5Q8N6W0 485 aaKnown RBP14.45□□□□□ -0.1
CUX1-209ENST00000487284 HMCESQ96FZ2 354 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 XPO6Q96QU8 1125 aaKnown RBP14.45□□□□□ -0.1
CUX1-209ENST00000487284 DHRS4Q9BTZ2 278 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 ZC3H7BQ9UGR2 993 aaKnown RBP14.45□□□□□ -0.1
CUX1-209ENST00000487284 STOML2Q9UJZ1 356 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 TTLL3Q9Y4R7 772 aa14.45□□□□□ -0.1
CUX1-209ENST00000487284 KIF26AQ9ULI4 1882 aaPredicted RBP14.44□□□□□ -0.1
CUX1-209ENST00000487284 A6NNZ2 444 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 PSMD3O43242 534 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 TSPAN3O60637 253 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 C1QAP02745 245 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 LAMP2P13473 410 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 SGSHP51688 502 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 GEMIN4P57678 1058 aaKnown RBP14.44□□□□□ -0.1
CUX1-209ENST00000487284 SMAD4Q13485 552 aaKnown RBP14.44□□□□□ -0.1
CUX1-209ENST00000487284 PRPSAP1Q14558 356 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 SKIDA1Q1XH10 827 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 TUBB8Q3ZCM7 444 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 RABGAP1LQ5R372 815 aa14.44□□□□□ -0.1
CUX1-209ENST00000487284 TAOK1Q7L7X3 1001 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms