RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-241	ENST00000487169	DUPD1	Q68J44	220 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	DLK2	Q6UY11	383 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	STRADA	Q7RTN6	431 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	ADCK1	Q86TW2	530 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	CD99L2	Q8TCZ2	262 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	P2RY11	Q96G91	374 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	ZFYVE19	Q96K21	471 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	SEPHS2	Q99611	448 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	EBNA1BP2	Q99848	306 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	ATP13A3	Q9H7F0	1226 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	MSRA	Q9UJ68	235 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	CROT	Q9UKG9	612 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	TPP1	O14773	563 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	MRAS	O14807	208 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	TLL1	O43897	1013 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	LRRC37A3	O60309	1634 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	C4BPA	P04003	597 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	SHBG	P04278	402 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	ACADS	P16219	412 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	SP100	P23497	879 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	PFKP	Q01813	784 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	KCTD19	Q17RG1	926 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	MAGED4	Q96JG8	741 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	POMK	Q9H5K3	350 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	ZNF112	Q9UJU3	913 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	INPP4B	O15327	924 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	CILP	O75339	1184 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	SPATA31D3	P0C874	917 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	VAC14	Q08AM6	782 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	MSLN	Q13421	630 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	BRMS1L	Q5PSV4	323 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	VSTM1	Q6UX27	236 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	SPATA31D4	Q6ZUB0	917 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	ATG16L2	Q8NAA4	619 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	C1QTNF7	Q9BXJ2	289 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	ANKRD6	Q9Y2G4	727 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	C1orf232	A0A0U1RR37	186 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	CYP7B1	O75881	506 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	IFNA14	P01570	189 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	IL1B	P01584	269 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	DGKA	P23743	735 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	PPP2R1B	P30154	601 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	RPA3	P35244	121 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	WNT3A	P56704	352 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	UBE3A	Q05086	875 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	TRAF2	Q12933	501 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	INSC	Q1MX18	579 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	SNX32	Q86XE0	403 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	HJURP	Q8NCD3	748 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	PIWIL2	Q8TC59	973 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	CNBD2	Q96M20	576 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	KLHL5	Q96PQ7	755 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	OMD	Q99983	421 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	ZNF229	Q9UJW7	825 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169	SNX8	Q9Y5X2	465 aa		13.53	□□□□□ -0.24
HDLBP-241	ENST00000487169		H3BMM5	538 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	PSMD12	O00232	456 aa	Predicted RBP	13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	DAB1	O75553	588 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	SELP	P16109	830 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	TFEB	P19484	476 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	CLK2	P49760	499 aa	Known RBP	13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	RAD23A	P54725	363 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	CDK18	Q07002	472 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	MAD2L1	Q13257	205 aa	Predicted RBP	13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	ZNF438	Q7Z4V0	828 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	TSPAN18	Q96SJ8	248 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	PDZD7	Q9H5P4	517 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	KL	Q9UEF7	1012 aa		13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	MED1	Q15648	1581 aa	Predicted RBP	13.52	□□□□□ -0.24
HDLBP-241	ENST00000487169	MAN1A2	O60476	641 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	PAGE1	O75459	146 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	BANF1	O75531	89 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	CBX6	O95503	412 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	ANXA5	P08758	320 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	SMPD1	P17405	629 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	S100A5	P33763	92 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	CENPA	P49450	140 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	NPY5R	Q15761	445 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	STXBP5	Q5T5C0	1151 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	PLEKHA7	Q6IQ23	1121 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	RBM23	Q86U06	439 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	NKAP	Q8N5F7	415 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	SPPL2A	Q8TCT8	520 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	BPIFA1	Q9NP55	256 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	RAD18	Q9NS91	495 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	RBPJL	Q9UBG7	517 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	hCG_2014768	A0A024R1R8	64 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	AGPS	O00116	658 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	SEPT4	O43236	478 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	MSI1	O43347	362 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	TSPAN1	O60635	241 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	ERBB2	P04626	1255 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	RPN2	P04844	631 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	LTA4H	P09960	611 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	RRM2	P31350	389 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	MAPK9	P45984	424 aa		13.52	□□□□□ -0.25
HDLBP-241	ENST00000487169	PIK3CG	P48736	1102 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms