RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PREBQ9HCU5 417 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 ATP13A1Q9HD20 1204 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 DMTF1Q9Y222 760 aa25.09■■□□□ 1.61
LIME1-206ENST00000487026 ANKRD11Q6UB99 2663 aaPredicted RBP25.09■■□□□ 1.61
LIME1-206ENST00000487026 DOCK4Q8N1I0 1966 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 A0A1W2PQU0 124 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 ENC1O14682 589 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 LDOC1O95751 146 aaPredicted RBP25.08■■□□□ 1.61
LIME1-206ENST00000487026 PRNPP04156 253 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 ADRA1BP35368 520 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 STAT1P42224 750 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 DNA2P51530 1060 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 CLCN6P51797 869 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 GNA12Q03113 381 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 SYCP1Q15431 976 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 DYRK4Q9NR20 520 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 NDFIP2Q9NV92 336 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 OR12D3Q9UGF7 316 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 IL36AQ9UHA7 158 aa25.08■■□□□ 1.61
LIME1-206ENST00000487026 GOLGA4Q13439 2230 aaKnown RBP25.08■■□□□ 1.6
LIME1-206ENST00000487026 ZFYVE26Q68DK2 2539 aa25.08■■□□□ 1.6
LIME1-206ENST00000487026 FAM72CH0Y354 149 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 PRAMEF26H0Y7S4 382 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 LEFTY1O75610 366 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 SDC4P31431 198 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 NUDT1P36639 197 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 ACVRL1P37023 503 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 RECQLP46063 649 aaPredicted RBP25.07■■□□□ 1.6
LIME1-206ENST00000487026 ARF5P84085 180 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 FAM72AQ5TYM5 149 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 FAM72DQ6L9T8 149 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 RETSATQ6NUM9 610 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 RWDD4Q6NW29 188 aaKnown RBP25.07■■□□□ 1.6
LIME1-206ENST00000487026 ZNF783Q6ZMS7 281 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 IQCHQ86VS3 1027 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 FAM72BQ86X60 149 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 ERVMER34-1Q9H9K5 563 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 FZD3Q9NPG1 666 aa25.07■■□□□ 1.6
LIME1-206ENST00000487026 PPARGC1AQ9UBK2 798 aaKnown RBP25.07■■□□□ 1.6
LIME1-206ENST00000487026 FCF1Q9Y324 198 aaKnown RBP25.07■■□□□ 1.6
LIME1-206ENST00000487026 FAM208BQ5VWN6 2430 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 C2CD4BA6NLJ0 364 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 YKT6O15498 198 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 UNGP13051 313 aaPredicted RBP25.06■■□□□ 1.6
LIME1-206ENST00000487026 RXRGP48443 463 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 CLDN6P56747 220 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 PTP4A2Q12974 167 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 ARL13BQ3SXY8 428 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 SASS6Q6UVJ0 657 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 ERN2Q76MJ5 926 aaKnown RBP25.06■■□□□ 1.6
LIME1-206ENST00000487026 GALNT15Q8N3T1 639 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 NEK11Q8NG66 645 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 KLHDC7BQ96G42 594 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 WASF2Q9Y6W5 498 aa25.06■■□□□ 1.6
LIME1-206ENST00000487026 SDC3O75056 442 aa25.05■■□□□ 1.6
LIME1-206ENST00000487026 PCDH8O95206 1070 aa25.05■■□□□ 1.6
LIME1-206ENST00000487026 SERPINH1P50454 418 aaKnown RBP25.05■■□□□ 1.6
LIME1-206ENST00000487026 SMAD1Q15797 465 aaKnown RBP25.05■■□□□ 1.6
LIME1-206ENST00000487026 ZNF284Q2VY69 593 aa25.05■■□□□ 1.6
LIME1-206ENST00000487026 TRIM72Q6ZMU5 477 aa25.05■■□□□ 1.6
LIME1-206ENST00000487026 HORMAD1Q86X24 394 aa25.05■■□□□ 1.6
LIME1-206ENST00000487026 CCDC185Q8N715 623 aa25.05■■□□□ 1.6
LIME1-206ENST00000487026 ADAM22Q9P0K1 906 aa25.05■■□□□ 1.6
LIME1-206ENST00000487026 LIMA1Q9UHB6 759 aaKnown RBP25.05■■□□□ 1.6
LIME1-206ENST00000487026 DNAI1Q9UI46 699 aa25.05■■□□□ 1.6
LIME1-206ENST00000487026 ZFR2Q9UPR6 939 aaKnown RBP25.05■■□□□ 1.6
LIME1-206ENST00000487026 TRABD2BA6NFA1 517 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 MAGEC1O60732 1142 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 CD160O95971 181 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 KRT3P12035 628 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 RFC1P35251 1148 aaPredicted RBP25.04■■□□□ 1.6
LIME1-206ENST00000487026 NSFP46459 744 aaKnown RBP25.04■■□□□ 1.6
LIME1-206ENST00000487026 UBXN1Q04323 297 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 SLC20A2Q08357 652 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 CCDC15Q0P6D6 951 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 CLEC16AQ2KHT3 1053 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 CARD16Q5EG05 197 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 MANEALQ5VSG8 457 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 SEL1L3Q68CR1 1132 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 LEKR1Q6ZMV7 388 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 KANSL1Q7Z3B3 1105 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 OXR1Q8N573 874 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 TMEM145Q8NBT3 493 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 FAM172AQ8WUF8 416 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 HDAC8Q9BY41 377 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 CEP44Q9C0F1 390 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 OSBPL2Q9H1P3 480 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 CAAP1Q9H8G2 361 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 ANO10Q9NW15 660 aa25.04■■□□□ 1.6
LIME1-206ENST00000487026 THEGLP0DJG4 465 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 CDK11BP21127 795 aaKnown RBP25.03■■□□□ 1.6
LIME1-206ENST00000487026 PTPN9P43378 593 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 HDAC4P56524 1084 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 CLDN2P57739 230 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 MYL5Q02045 173 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 OVGP1Q12889 678 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 CAMK2BQ13554 666 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 SFMBT2Q5VUG0 894 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 NEK5Q6P3R8 708 aa25.03■■□□□ 1.6
LIME1-206ENST00000487026 WDR59Q6PJI9 974 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms