RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ZDHHC5Q9C0B5 715 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 MAGEH1Q9H213 219 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 NOL6Q9H6R4 1146 aaKnown RBP19.96■□□□□ 0.79
SNX5-213ENST00000486039 GPATCH2LQ9NWQ4 482 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 MYO1AQ9UBC5 1043 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 FCF1Q9Y324 198 aaKnown RBP19.96■□□□□ 0.79
SNX5-213ENST00000486039 LUC7L2Q9Y383 392 aaKnown RBP19.96■□□□□ 0.79
SNX5-213ENST00000486039 RAMP2O60895 175 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 MYBL1P10243 752 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 DESP17661 470 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 CASP14P31944 242 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 ETFBP38117 255 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 AFF3P51826 1226 aaKnown RBP19.95■□□□□ 0.78
SNX5-213ENST00000486039 CA9Q16790 459 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 AGBL4Q5VU57 503 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 LAYNQ6UX15 382 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 DPY19L3Q6ZPD9 716 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 RTL3Q8N8U3 475 aaKnown RBP19.95■□□□□ 0.78
SNX5-213ENST00000486039 TMIEQ8NEW7 156 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 CCDC114Q96M63 670 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 PEBP4Q96S96 227 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 EPAS1Q99814 870 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 CEP44Q9C0F1 390 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 TSPY26PQ9H489 355 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 PCSK1NQ9UHG2 260 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 FARP1Q9Y4F1 1045 aaPredicted RBP19.95■□□□□ 0.78
SNX5-213ENST00000486039 SCINQ9Y6U3 715 aa19.95■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3DA0A087WVF3 549 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3IA0A087WXS9 549 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3EA0A087X179 549 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3KA0A087X1G2 549 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 CXorf51AA0A1B0GTR3 108 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3FA6NER0 549 aaPredicted RBP19.94■□□□□ 0.78
SNX5-213ENST00000486039 WASH4PA8MWX3 477 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3LB9A6J9 549 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 SLC7A4O43246 635 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 PLRG1O43660 514 aaKnown RBP19.94■□□□□ 0.78
SNX5-213ENST00000486039 TOP3BO95985 862 aaKnown RBP19.94■□□□□ 0.78
SNX5-213ENST00000486039 PROS1P07225 676 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3HP0C7X1 549 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 CD59P13987 128 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 GRIA4P48058 902 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 CCR5P51681 352 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 PPP2CBP62714 309 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 PPP2CAP67775 309 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 POLD3Q15054 466 aaPredicted RBP19.94■□□□□ 0.78
SNX5-213ENST00000486039 ARSIQ5FYB1 569 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3GQ6DHY5 549 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3CQ6IPX1 549 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TBC1D3Q8IZP1 549 aaPredicted RBP19.94■□□□□ 0.78
SNX5-213ENST00000486039 PCDH20Q8N6Y1 951 aaKnown RBP19.94■□□□□ 0.78
SNX5-213ENST00000486039 ARRDC3Q96B67 414 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 TRIM11Q96F44 468 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 IL21RQ9HBE5 538 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 ARHGAP20Q9P2F6 1191 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 IL36AQ9UHA7 158 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 AP4E1Q9UPM8 1137 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 WASF2Q9Y6W5 498 aa19.94■□□□□ 0.78
SNX5-213ENST00000486039 A0A087X0T9 212 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 KPNA3O00505 521 aaPredicted RBP19.93■□□□□ 0.78
SNX5-213ENST00000486039 KDELR3O43731 214 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 FAM228BP0C875 321 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 SPINK2P20155 84 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 MIPP30301 263 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 RECQLP46063 649 aaPredicted RBP19.93■□□□□ 0.78
SNX5-213ENST00000486039 TAS2R38P59533 333 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 RACK1P63244 317 aaKnown RBP19.93■□□□□ 0.78
SNX5-213ENST00000486039 KIF19Q2TAC6 998 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 HLA-BQ31612 363 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 CARD16Q5EG05 197 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 KCNT1Q5JUK3 1230 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 ERMARDQ5T6L9 678 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 PIP5KL1Q5T9C9 394 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 LEKR1Q6ZMV7 388 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 CYP4V2Q6ZWL3 525 aaPredicted RBP19.93■□□□□ 0.78
SNX5-213ENST00000486039 GRIN3AQ8TCU5 1115 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 SLC6A18Q96N87 628 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 SNRNP25Q9BV90 132 aaKnown RBP19.93■□□□□ 0.78
SNX5-213ENST00000486039 KDM4CQ9H3R0 1056 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 GAREM1Q9H706 876 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 CATSPERBQ9H7T0 1116 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 MRPL47Q9HD33 250 aaKnown RBP19.93■□□□□ 0.78
SNX5-213ENST00000486039 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.93■□□□□ 0.78
SNX5-213ENST00000486039 USP24Q9UPU5 2620 aa19.93■□□□□ 0.78
SNX5-213ENST00000486039 CEP295Q9C0D2 2601 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 CHD5Q8TDI0 1954 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 SPAARA0A1B0GVQ0 90 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 WNT9AO14904 365 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 LATO43561 262 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 LRCH4O75427 683 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 LEFTY1O75610 366 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 RNF8O76064 485 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 PRNPP04156 253 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 TPM3P06753 285 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 DNA2P51530 1060 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 TEAD4Q15561 434 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 IL27RAQ6UWB1 636 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 UNQ6494/PRO21346Q6UXR6 183 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 VPS36Q86VN1 386 aa19.92■□□□□ 0.78
SNX5-213ENST00000486039 RNF214Q8ND24 703 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms