RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 RRAGAQ7L523 313 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 EFL1Q7Z2Z2 1120 aaKnown RBP10.12□□□□□ -0.79
SND1-213ENST00000486037 IQCHQ86VS3 1027 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 ZSCAN30Q86W11 494 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TBC1D3Q8IZP1 549 aaPredicted RBP10.12□□□□□ -0.79
SND1-213ENST00000486037 STK40Q8N2I9 435 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 ARL14Q8N4G2 192 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 FBXL13Q8NEE6 735 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 CCDC112Q8NEF3 446 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 WDR36Q8NI36 951 aaKnown RBP10.12□□□□□ -0.79
SND1-213ENST00000486037 NOX5Q96PH1 765 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 TWNKQ96RR1 684 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 CHP1Q99653 195 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 RAB20Q9NX57 234 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 NLGN3Q9NZ94 848 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 APEX2Q9UBZ4 518 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 DNAJC12Q9UKB3 198 aa10.12□□□□□ -0.79
SND1-213ENST00000486037 LRRK1Q38SD2 2015 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 CPED1A4D0V7 1026 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 FAM200BP0CF97 657 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 PNMA6AP0CW24 399 aaPredicted RBP10.11□□□□□ -0.79
SND1-213ENST00000486037 SFTPCP11686 197 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 HGFP14210 728 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 VAV1P15498 845 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 POLR2EP19388 210 aaKnown RBP10.11□□□□□ -0.79
SND1-213ENST00000486037 HNRNPH3P31942 346 aaKnown RBP10.11□□□□□ -0.79
SND1-213ENST00000486037 CASRP41180 1078 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 PIK3CAP42336 1068 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 NUMBP49757 651 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 NDST1P52848 882 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 AP3M2P53677 418 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 RIPPLY3P57055 190 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 SFSWAPQ12872 951 aaKnown RBP10.11□□□□□ -0.79
SND1-213ENST00000486037 BIRC3Q13489 604 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 MEA1Q16626 185 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 RAD9BQ6WBX8 426 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.11□□□□□ -0.79
SND1-213ENST00000486037 RBM44Q6ZP01 1051 aaKnown RBP10.11□□□□□ -0.79
SND1-213ENST00000486037 MMS22LQ6ZRQ5 1243 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 B3GNT8Q7Z7M8 397 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 SLC22A18ASQ8N1D0 253 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 C17orf53Q8N3J3 647 aaPredicted RBP10.11□□□□□ -0.79
SND1-213ENST00000486037 ZNF276Q8N554 614 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 ZNF397Q8NF99 534 aaPredicted RBP10.11□□□□□ -0.79
SND1-213ENST00000486037 KIAA1524Q8TCG1 905 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 KLK6Q92876 244 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 KAT5Q92993 513 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 TATDN2Q93075 761 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 MYEOVQ96EZ4 313 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 KLHDC7BQ96G42 594 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 TNIP3Q96KP6 325 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 KREMEN1Q96MU8 473 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 FZD3Q9NPG1 666 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 KLHL11Q9NVR0 708 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 MARCH2Q9P0N8 246 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 USP3Q9Y6I4 520 aa10.11□□□□□ -0.79
SND1-213ENST00000486037 OTOGQ6ZRI0 2925 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 POLQO75417 2590 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 CCDC187A0A096LP49 1063 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 GOLGA6L7A0A1B0GV03 622 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 SOWAHDA6NJG2 315 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 SCAMP1O15126 338 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 RNASEH1O60930 286 aaKnown RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 ATP5BP06576 529 aaKnown RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 RALAP11233 206 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 PRLRP16471 622 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 CSKP41240 450 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 INHBCP55103 352 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 ZNF177Q13360 481 aaPredicted RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 NCOA4Q13772 614 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 RAPGEF1Q13905 1077 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 STAT4Q14765 748 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 TRIP4Q15650 581 aaPredicted RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 ARHGAP44Q17R89 818 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 HGSNATQ68CP4 663 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 SPOPLQ6IQ16 392 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 RFWD3Q6PCD5 774 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 C14orf80Q86SX3 495 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 PRPF39Q86UA1 669 aaKnown RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 TMTC1Q8IUR5 882 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 CRYBG2Q8N1P7 616 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 TMEM145Q8NBT3 493 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 OR13H1Q8NG92 308 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 NDRG1Q92597 394 aaKnown RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 SYN2Q92777 582 aaPredicted RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 TTC17Q96AE7 1141 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 FAM131CQ96AQ9 280 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 NT5C1BQ96P26 610 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 APOBEC3GQ9HC16 384 aaKnown RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 UBE2TQ9NPD8 197 aaPredicted RBP10.1□□□□□ -0.79
SND1-213ENST00000486037 CLIC5Q9NZA1 410 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 SLCO3A1Q9UIG8 710 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 DAAM1Q9Y4D1 1078 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 SCN8AQ9UQD0 1980 aa10.1□□□□□ -0.79
SND1-213ENST00000486037 ESPNB1AK53 854 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 F8VZ95 297 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 AGRPO00253 132 aa10.09□□□□□ -0.79
SND1-213ENST00000486037 PLRG1O43660 514 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms