RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 FSCBQ5H9T9 825 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 ZNF484Q5JVG2 852 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 TBC1D9BQ66K14 1250 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 HEPHL1Q6MZM0 1159 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 RINLQ6ZS11 566 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 NOL8Q76FK4 1167 aaKnown RBP4.2□□□□□ -1.74
VPS41-213ENST00000485955 WDR5BQ86VZ2 330 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 NEXN-AS1Q8NBZ9 246 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 LINS1Q8NG48 757 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 LMO3Q8TAP4 145 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 GOLGA1Q92805 767 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 ZNF333Q96JL9 665 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 FRG2BQ96QU4 278 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 TMLHEQ9NVH6 421 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 WNT16Q9UBV4 365 aa4.2□□□□□ -1.74
VPS41-213ENST00000485955 TMEM247A6NEH6 219 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 SAC3D1A6NKF1 404 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 FAM155BO75949 473 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 CLDN7O95471 211 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 CHKAP35790 457 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 PNPLA4P41247 253 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 DPP6P42658 865 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 NFATC4Q14934 902 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 PRAMEF19Q5SWL8 479 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 TMEM268Q5VZI3 342 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 AADACL2Q6P093 401 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 FAM83HQ6ZRV2 1179 aaPredicted RBP4.19□□□□□ -1.74
VPS41-213ENST00000485955 C18orf65Q6ZTR6 163 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 SERPINA11Q86U17 422 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 ZDHHC23Q8IYP9 409 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 SAMD3Q8N6K7 520 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 SMRP1Q8NCR6 262 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 FAM84BQ96KN1 310 aaPredicted RBP4.19□□□□□ -1.74
VPS41-213ENST00000485955 IFT27Q9BW83 186 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 SEZ6LQ9BYH1 1024 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 NLKQ9UBE8 527 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 HDAC6Q9UBN7 1215 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 SEL1LQ9UBV2 794 aa4.19□□□□□ -1.74
VPS41-213ENST00000485955 RNMTO43148 476 aaKnown RBP4.18□□□□□ -1.74
VPS41-213ENST00000485955 TFRCP02786 760 aaKnown RBP4.18□□□□□ -1.74
VPS41-213ENST00000485955 TGFB3P10600 412 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 ITGB8P26012 769 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 PTPN9P43378 593 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 MTNR1AP48039 350 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 KCNJ4P48050 445 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 CLCNKBP51801 687 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 CDH12P55289 794 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 ARHGAP8P85298 464 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 THOC5Q13769 683 aaKnown RBP4.18□□□□□ -1.74
VPS41-213ENST00000485955 BYSLQ13895 437 aaKnown RBP4.18□□□□□ -1.74
VPS41-213ENST00000485955 POSTNQ15063 836 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 AP5B1Q2VPB7 878 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 SH2D4BQ5SQS7 431 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 FAM83BQ5T0W9 1011 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 NADSYN1Q6IA69 706 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 CAPRIN2Q6IMN6 1127 aaKnown RBP4.18□□□□□ -1.74
VPS41-213ENST00000485955 DLK2Q6UY11 383 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 TEX45Q8NA69 505 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 SLC35F5Q8WV83 523 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 RILPL2Q969X0 211 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 CTDSP1Q9GZU7 261 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 TWSG1Q9GZX9 223 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 CXorf56Q9H5V9 222 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 CHODLQ9H9P2 273 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 CD93Q9NPY3 652 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 RIPOR2Q9Y4F9 1068 aa4.18□□□□□ -1.74
VPS41-213ENST00000485955 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.17□□□□□ -1.74
VPS41-213ENST00000485955 C17orf102A2RUQ5 167 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 B9A039 149 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 VWA5AO00534 786 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 SEPT4O43236 478 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 CCNT1O60563 726 aaKnown RBP4.17□□□□□ -1.74
VPS41-213ENST00000485955 SOX30O94993 753 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 CBX6O95503 412 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 GLUD1P00367 558 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 MYZAPP0CAP1 466 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 FGF3P11487 239 aaPredicted RBP4.17□□□□□ -1.74
VPS41-213ENST00000485955 ENO3P13929 434 aaPredicted RBP4.17□□□□□ -1.74
VPS41-213ENST00000485955 ZNF12P17014 697 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 RFC1P35251 1148 aaPredicted RBP4.17□□□□□ -1.74
VPS41-213ENST00000485955 ADD2P35612 726 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 SKIV2L2P42285 1042 aaKnown RBP4.17□□□□□ -1.74
VPS41-213ENST00000485955 GLUD2P49448 558 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 TRAF3Q13114 568 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 IL13RA2Q14627 380 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 TDRD12Q587J7 1177 aaKnown RBP4.17□□□□□ -1.74
VPS41-213ENST00000485955 RUNDC3AQ59EK9 446 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 ATG9BQ674R7 924 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 PRSS57Q6UWY2 283 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 CLIP4Q8N3C7 705 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 GALNT15Q8N3T1 639 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 MYCT1Q8N699 235 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 RUBCNQ92622 972 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 LMLNQ96KR4 655 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 TEFMQ96QE5 360 aaKnown RBP4.17□□□□□ -1.74
VPS41-213ENST00000485955 LHPPQ9H008 270 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 SAYSD1Q9NPB0 183 aa4.17□□□□□ -1.74
VPS41-213ENST00000485955 SCN5AQ14524 2016 aa4.16□□□□□ -1.74
VPS41-213ENST00000485955 STX16-NPEPL1H3BU86 382 aa4.16□□□□□ -1.74
VPS41-213ENST00000485955 STX16O14662 325 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms