RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 SERPING1P05155 500 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 CYP1A2P05177 515 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 CTSLP07711 333 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 ZNF806P0C7X5 589 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 HOXB2P14652 356 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 TNFAIP3P21580 790 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 GPD1P21695 349 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 CASP14P31944 242 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 L1CAMP32004 1257 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 HTR7P34969 479 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 CSKP41240 450 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 PTGER3P43115 390 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 HCAR3P49019 387 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 SULT1E1P49888 294 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 OXCT1P55809 520 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 ARF5P84085 180 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 ZBTB16Q05516 673 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 DEUP1Q05D60 604 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 KLHL30Q0D2K2 578 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 CSRP2Q16527 193 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 HNRNPA1L2Q32P51 320 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 PITRM1Q5JRX3 1037 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 C9orf64Q5T6V5 341 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 ANO7Q6IWH7 933 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 C11orf74Q86VG3 221 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 PSTKQ8IV42 348 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 MFN1Q8IWA4 741 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 GPR161Q8N6U8 529 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 TSTD1Q8NFU3 115 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 UCMAQ8WVF2 138 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 DNASE2BQ8WZ79 361 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 EIF3CQ99613 913 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 CHP1Q99653 195 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 RSPH9Q9H1X1 276 aaPredicted RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 TSPY26PQ9H489 355 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 SYNCQ9H7C4 482 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 FAM204AQ9H8W3 233 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 EBF2Q9HAK2 575 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 PRSS16Q9NQE7 514 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 TMEM74BQ9NUR3 256 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 PARVAQ9NVD7 372 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 TMEM248Q9NWD8 314 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 WSB2Q9NYS7 404 aaPredicted RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 MPP6Q9NZW5 540 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 OR12D3Q9UGF7 316 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 ADAMTS1Q9UHI8 967 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 SLCO3A1Q9UIG8 710 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 SALL4Q9UJQ4 1053 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 VANGL2Q9ULK5 521 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 ERVW-1Q9UQF0 538 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 LUC7L2Q9Y383 392 aaKnown RBP5.87□□□□□ -1.47
CUX1-208ENST00000485792 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.87□□□□□ -1.472e-11■□□□□ 9.3
CUX1-208ENST00000485792 UNC13CQ8NB66 2214 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 DMXL2Q8TDJ6 3036 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 FREM2Q5SZK8 3169 aa5.87□□□□□ -1.47
CUX1-208ENST00000485792 TPRP12270 2363 aaKnown RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 TCRBV21S2A2A0A5A6 115 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 SERTM1A2A2V5 107 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ANKRD62A6NC57 917 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 TMCO5BA8MYB1 307 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 TTC34A8MYJ7 566 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 GOLGA6L19H0YKK7 550 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 WNT9AO14904 365 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 SMAD6O43541 496 aaKnown RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 MFAP3LO75121 409 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ZNF217O75362 1048 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 LRCH4O75427 683 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ALDH1A2O94788 518 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 LRIG2O94898 1065 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ATP5BP06576 529 aaKnown RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 MYBL1P10243 752 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 POLR2EP19388 210 aaKnown RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 SDC4P31431 198 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 HOXD12P35452 270 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 DRD3P35462 400 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 PCK1P35558 622 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ACVRL1P37023 503 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ARSEP51690 589 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 LIMK1P53667 647 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 RNASE9P60153 205 aaKnown RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 RPS14P62263 151 aaKnown RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 TPM4P67936 248 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ATP11AP98196 1134 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ECT2LQ008S8 904 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 SLC25A11Q02978 314 aaKnown RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 PTSQ03393 145 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 SULT2A1Q06520 285 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 NME3Q13232 169 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 TRIM14Q14142 442 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 SIM2Q14190 667 aaPredicted RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 ASIC2Q16515 512 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 SLC18A3Q16572 532 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 CDO1Q16878 200 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 USP39Q53GS9 565 aaKnown RBP5.86□□□□□ -1.47
CUX1-208ENST00000485792 RABGAP1LQ5R372 815 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 AFMIDQ63HM1 303 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 LAYNQ6UX15 382 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 ARHGAP36Q6ZRI8 547 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 CHSY1Q86X52 802 aa5.86□□□□□ -1.47
CUX1-208ENST00000485792 TMPRSS6Q8IU80 811 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms