RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 WDR49Q8IV35 697 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 SCN4BQ8IWT1 228 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PHC2Q8IXK0 858 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 DIS3L2Q8IYB7 885 aaKnown RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 PQLC1Q8N2U9 271 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ZNF321PQ8N8H1 164 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 DTX3Q8N9I9 347 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PSMA8Q8TAA3 256 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 URGCPQ8TCY9 931 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 KCNG4Q8TDN1 519 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ZNF480Q8WV37 535 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PIBF1Q8WXW3 757 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 STAMQ92783 540 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 RAB7BQ96AH8 199 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 RMDN1Q96DB5 314 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 C18orf8Q96DM3 657 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 SNX27Q96L92 541 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 NLRP4Q96MN2 994 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 MNTQ99583 582 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CCDC77Q9BR77 488 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 MAGEB5Q9BZ81 275 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PUS3Q9BZE2 481 aaKnown RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 CRNKL1Q9BZJ0 848 aaKnown RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 HSD3B7Q9H2F3 369 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 CENPHQ9H3R5 247 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 GORASP2Q9H8Y8 452 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 A1CFQ9NQ94 594 aaKnown RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 SDHAF3Q9NRP4 125 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 SERINC1Q9NRX5 453 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 LANCL2Q9NS86 450 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 DECR2Q9NUI1 292 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 TMEM140Q9NV12 185 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 TMEM160Q9NX00 188 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 DNAJB9Q9UBS3 223 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 ATP6V1HQ9UI12 483 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 MAD2L2Q9UI95 211 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 FEM1BQ9UK73 627 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 SCAF8Q9UPN6 1271 aaKnown RBP4.66□□□□□ -1.66
RTN4-213ENST00000485749 SLC8A2Q9UPR5 921 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 SNX9Q9Y5X1 595 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 PMF1-BGLAPU3KQ54 211 aa4.66□□□□□ -1.66
RTN4-213ENST00000485749 MTUS2Q5JR59 1369 aa4.65□□□□□ -1.66
RTN4-213ENST00000485749 TRAV34A0A0B4J273 112 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 hCG_1809904A0A1W2PP81 198 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 A0A1W2PPE2 198 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 A0A1W2PR64 198 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ARHGEF37A1IGU5 675 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 FRMD3A2A2Y4 597 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 FAM234BA2RU67 622 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 TRDMT1O14717 391 aaKnown RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 TEX33O43247 280 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ZW10O43264 779 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ADCY6O43306 1168 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ZNF189O75820 626 aaPredicted RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 LARGE1O95461 756 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ABHD16AO95870 558 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 TPOP07202 933 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 GAAP10253 952 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 CLUP10909 449 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 RALAP11233 206 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 RARGP13631 454 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ANXA8P13928 327 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 RXRAP19793 462 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 GLRA2P23416 452 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 IGFBP6P24592 240 aaPredicted RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 MCM3P25205 808 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 KLRC1P26715 233 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 CST5P28325 142 aaPredicted RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 GRK5P34947 590 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ADRA1BP35368 520 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 SLC16A2P36021 539 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ARCN1P48444 511 aaKnown RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 GCLCP48506 637 aaPredicted RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 PIK3CGP48736 1102 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 DHPSP49366 369 aaPredicted RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 PLCD1P51178 756 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 RARSP54136 660 aaKnown RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 ATXN3P54252 364 aaPredicted RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 SSTP61278 116 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 IL13RA1P78552 427 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 MXRA7P84157 204 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ZNF200P98182 395 aaPredicted RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 RNASELQ05823 741 aaKnown RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 SCN1BQ07699 218 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ITGA7Q13683 1181 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 BYSLQ13895 437 aaKnown RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 HNRNPDQ14103 355 aaKnown RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 PDK1Q15118 436 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 MAPRE2Q15555 327 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 CR1LQ2VPA4 569 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 Q3ZCU0 254 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 SMUG1Q53HV7 270 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 ANXA8L1Q5VT79 327 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 TMEM200BQ69YZ2 307 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 MIS18BP1Q6P0N0 1132 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 NFRKBQ6P4R8 1299 aa4.65□□□□□ -1.67
RTN4-213ENST00000485749 FAM83HQ6ZRV2 1179 aaPredicted RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 MARK2Q7KZI7 788 aaKnown RBP4.65□□□□□ -1.67
RTN4-213ENST00000485749 MIER3Q7Z3K6 550 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms