RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PRAMEF11O60813 436 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 TGM1P22735 817 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 SLC8A1P32418 973 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 HOXD12P35452 270 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 VAV2P52735 878 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 RPL6Q02878 288 aaKnown RBP18.12■□□□□ 0.49
SREBF1-213ENST00000485080 KRT81Q14533 505 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 LPAL2Q16609 132 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 ATP13A4Q4VNC1 1196 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 C11orf63Q6NUN7 778 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 TMCO3Q6UWJ1 677 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 TXLNBQ8N3L3 684 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 NPWQ8N729 165 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 SLC39A8Q9C0K1 460 aa18.12■□□□□ 0.49
SREBF1-213ENST00000485080 SPTBN4Q9H254 2564 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 BCLAF3A2AJT9 711 aaKnown RBP18.11■□□□□ 0.49
SREBF1-213ENST00000485080 RCCD1A6NED2 376 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 MID1O15344 667 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 BUB1O43683 1085 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 FOXD2O60548 495 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-213ENST00000485080 BUB1BO60566 1050 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-213ENST00000485080 GSRP00390 522 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 AMPD1P23109 780 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 SERPINB6P35237 376 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 NOP2P46087 812 aaKnown RBP18.11■□□□□ 0.49
SREBF1-213ENST00000485080 PAPOLAP51003 745 aaKnown RBP18.11■□□□□ 0.49
SREBF1-213ENST00000485080 CARD16Q5EG05 197 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 PLA2G2CQ5R387 149 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 PEAR1Q5VY43 1037 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-213ENST00000485080 LRRC49Q8IUZ0 686 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 KCTD6Q8NC69 237 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 FOXJ1Q92949 421 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 LRIG1Q96JA1 1093 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 GRPEL1Q9HAV7 217 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 ETNK2Q9NVF9 386 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 FBXL12Q9NXK8 326 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 NCKAP1Q9Y2A7 1128 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 ALG6Q9Y672 507 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 PI4KAP42356 2102 aa18.11■□□□□ 0.49
SREBF1-213ENST00000485080 DMXL1Q9Y485 3027 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 RALGAPA1Q6GYQ0 2036 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 TMEM110-MUSTN1A8MSY1 372 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 C1QTNF3-AMACRE9PGA6 284 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 SLC7A4O43246 635 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 NDUFS2O75306 463 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 IL1BP01584 269 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 PRNPP04156 253 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 CD48P09326 243 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 COMTP21964 271 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 KDELR1P24390 212 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 CHRNA3P32297 505 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 RECQLP46063 649 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-213ENST00000485080 RFTN1Q14699 578 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-213ENST00000485080 PAFAH1B3Q15102 231 aaKnown RBP18.1■□□□□ 0.49
SREBF1-213ENST00000485080 ANKRD20A8PQ5CZ79 823 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 DPY19L3Q6ZPD9 716 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 RHOT1Q8IXI2 618 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 TMEFF1Q8IYR6 380 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 AADATQ8N5Z0 425 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 CCDC112Q8NEF3 446 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 TPCN2Q8NHX9 752 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 PCDH19Q8TAB3 1148 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 PIP4K2CQ8TBX8 421 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 DNASE2BQ8WZ79 361 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 CELF6Q96J87 481 aaKnown RBP18.1■□□□□ 0.49
SREBF1-213ENST00000485080 ZNF599Q96NL3 588 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 BTBD1Q9H0C5 482 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 SALL4Q9UJQ4 1053 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 SARDHQ9UL12 918 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 FCF1Q9Y324 198 aaKnown RBP18.1■□□□□ 0.49
SREBF1-213ENST00000485080 CEP192Q8TEP8 1941 aa18.1■□□□□ 0.49
SREBF1-213ENST00000485080 TNRC6BQ9UPQ9 1833 aaKnown RBP18.09■□□□□ 0.49
SREBF1-213ENST00000485080 KNL1Q8NG31 2342 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 GOLGA6L3A6NEY3 463 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 PSTPIP1O43586 416 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 TMCC1O94876 653 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 CTSLP07711 333 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 DRD3P35462 400 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 PTGER3P43115 390 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 PSMD8P48556 350 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 SNRPD1P62314 119 aaKnown RBP18.09■□□□□ 0.49
SREBF1-213ENST00000485080 ZNF33AQ06730 810 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 IL10RBQ08334 325 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 MMRN1Q13201 1228 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 CSRP2Q16527 193 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 TMCO4Q5TGY1 634 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 LYSMD4Q5XG99 296 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 CACUL1Q86Y37 369 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 SLC41A1Q8IVJ1 513 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 ACRBPQ8NEB7 543 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 OR2AP1Q8NGE2 309 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 RAPGEF5Q92565 580 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 VOPP1Q96AW1 172 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 HEPHQ9BQS7 1158 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 CALN1Q9BXU9 219 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 LACRTQ9GZZ8 138 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 TNKS2Q9H2K2 1166 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 KDM4CQ9H3R0 1056 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 DDX56Q9NY93 547 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms