RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 FBXO36Q8NEA4 188 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 LRRC8CQ8TDW0 803 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 RTP4Q96DX8 246 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CYTH2Q99418 400 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 RAD21L1Q9H4I0 556 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 EHD1Q9H4M9 534 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 RRAGCQ9HB90 399 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 SETD4Q9NVD3 440 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 FLRT1Q9NZU1 646 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 PAK5Q9P286 719 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 MBD2Q9UBB5 411 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 IPPQ9Y573 584 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 NUMBLQ9Y6R0 609 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 TRIP12Q14669 1992 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 SNPHO15079 494 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 MDM4O15151 490 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 HOXC11O43248 304 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 SPAG7O75391 227 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 ATP5HO75947 161 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 PFKMP08237 780 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 HOXC12P31275 282 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 SDC4P31431 198 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 FOXN2P32314 431 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 ELF3P78545 371 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 SLC6A3Q01959 620 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 OCLNQ16625 522 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 DGKDQ16760 1214 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 KIZQ2M2Z5 673 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CTC1Q2NKJ3 1217 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 GOLGA7BQ2TAP0 167 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 PKDCCQ504Y2 493 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 HP1BP3Q5SSJ5 553 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 SHEQ5VZ18 495 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 OR7E24Q6IFN5 339 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 SLC27A1Q6PCB7 646 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CYP4V2Q6ZWL3 525 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 ARCQ7LC44 396 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 HCAR2Q8TDS4 363 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CEP19Q96LK0 163 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 CMTM3Q96MX0 182 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 PEBP4Q96S96 227 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 PAFAH2Q99487 392 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 SLC4A5Q9BY07 1137 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 FAM49AQ9H0Q0 323 aaPredicted RBP9.4□□□□□ -0.9
USP16-206ENST00000485067 NCOR1P1Q9H4R4 102 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 FAIMQ9NVQ4 179 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 HES2Q9Y543 173 aa9.4□□□□□ -0.9
USP16-206ENST00000485067 SCN1AP35498 2009 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 TMEM114B3SHH9 223 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 PIK3R2O00459 728 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 PPEF2O14830 753 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 TMEM63AO94886 807 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 ARHGEF15O94989 841 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 ITGA2BP08514 1039 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 CYP3A5P20815 502 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 SP100P23497 879 aaPredicted RBP9.39□□□□□ -0.91
USP16-206ENST00000485067 SSTR1P30872 391 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 RPA3P35244 121 aaPredicted RBP9.39□□□□□ -0.91
USP16-206ENST00000485067 IDUAP35475 653 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 GTF2A2P52657 109 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 ATN1P54259 1190 aaPredicted RBP9.39□□□□□ -0.91
USP16-206ENST00000485067 YARSP54577 528 aaKnown RBP9.39□□□□□ -0.91
USP16-206ENST00000485067 ADARP55265 1226 aaKnown RBP9.39□□□□□ -0.91
USP16-206ENST00000485067 VBP1P61758 197 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 CDK18Q07002 472 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 KCNJ11Q14654 390 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 RFTN1Q14699 578 aaPredicted RBP9.39□□□□□ -0.91
USP16-206ENST00000485067 CYTH1Q15438 398 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 TAF5Q15542 800 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 ADRM1Q16186 407 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 NFE2Q16621 373 aaPredicted RBP9.39□□□□□ -0.91
USP16-206ENST00000485067 CCL14Q16627 93 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 DUSP28Q4G0W2 176 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 SPDYAQ5MJ70 313 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 CLVS2Q5SYC1 327 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 SPRYD7Q5W111 196 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 CST9Q5W186 159 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 CGB2Q6NT52 195 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 BORAQ6PGQ7 559 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 LPCAT2Q7L5N7 544 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 NKAIN4Q8IVV8 208 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 BEST2Q8NFU1 509 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 TTLQ8NG68 377 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 PIP4K2CQ8TBX8 421 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 HDAC11Q96DB2 347 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 ZNF670Q9BS34 389 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 GCOM2Q9BZD3 368 aaPredicted RBP9.39□□□□□ -0.91
USP16-206ENST00000485067 ECT2Q9H8V3 914 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 PNPLA8Q9NP80 782 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 MORF4L1Q9UBU8 362 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 VTI1BQ9UEU0 232 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 GJD2Q9UKL4 321 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 PHTF1Q9UMS5 762 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 USH1CQ9Y6N9 552 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 COMMD3-BMI1R4GMX3 469 aa9.39□□□□□ -0.91
USP16-206ENST00000485067 BCLAF3A2AJT9 711 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms